Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MIR4754-201ENST00000582477 89 ntBASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 AC012044.1-201ENST00000603431 297 ntBASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 AL353770.1-201ENST00000614915 403 ntBASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 AC005786.4-201ENST00000623369 682 ntBASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCDHGC4Q9Y5F7 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 RPL13AP3-202ENST00000494676 1473 ntBASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 FGFR3P5-201ENST00000564496 886 ntBASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGC4Q9Y5F7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGC4Q9Y5F7 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGC4Q9Y5F7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGC4Q9Y5F7 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
PCDHGC4Q9Y5F7 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.33□□□□□ -0.11
PCDHGC4Q9Y5F7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGC4Q9Y5F7 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDHGC4Q9Y5F7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.33□□□□□ -0.11
PCDHGC4Q9Y5F7 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 IMP3P2-201ENST00000489760 475 ntBASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDHGC4Q9Y5F7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms