Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.62■■■■□ 3.13
PCDHGC4Q9Y5F7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
PCDHGC4Q9Y5F7 AL356512.1-201ENST00000607453 1739 ntBASIC33.67■■■□□ 2.98
PCDHGC4Q9Y5F7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.67■■■□□ 2.98
PCDHGC4Q9Y5F7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
PCDHGC4Q9Y5F7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
PCDHGC4Q9Y5F7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.21■■■□□ 2.91
PCDHGC4Q9Y5F7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.08■■■□□ 2.89
PCDHGC4Q9Y5F7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.83■■■□□ 2.85
PCDHGC4Q9Y5F7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.76■■■□□ 2.83
PCDHGC4Q9Y5F7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.59■■■□□ 2.81
PCDHGC4Q9Y5F7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.58■■■□□ 2.81
PCDHGC4Q9Y5F7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.56■■■□□ 2.8
PCDHGC4Q9Y5F7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.35■■■□□ 2.77
PCDHGC4Q9Y5F7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PCDHGC4Q9Y5F7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.08■■■□□ 2.73
PCDHGC4Q9Y5F7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
PCDHGC4Q9Y5F7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
PCDHGC4Q9Y5F7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.89■■■□□ 2.7
PCDHGC4Q9Y5F7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
PCDHGC4Q9Y5F7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.71■■■□□ 2.67
PCDHGC4Q9Y5F7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
PCDHGC4Q9Y5F7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
PCDHGC4Q9Y5F7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PCDHGC4Q9Y5F7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.33■■■□□ 2.61
PCDHGC4Q9Y5F7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PCDHGC4Q9Y5F7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
PCDHGC4Q9Y5F7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.21■■■□□ 2.59
PCDHGC4Q9Y5F7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
PCDHGC4Q9Y5F7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PCDHGC4Q9Y5F7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PCDHGC4Q9Y5F7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
PCDHGC4Q9Y5F7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PCDHGC4Q9Y5F7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
PCDHGC4Q9Y5F7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.93■■■□□ 2.54
PCDHGC4Q9Y5F7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.89■■■□□ 2.54
PCDHGC4Q9Y5F7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PCDHGC4Q9Y5F7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PCDHGC4Q9Y5F7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
PCDHGC4Q9Y5F7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHGC4Q9Y5F7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.81■■■□□ 2.52
PCDHGC4Q9Y5F7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHGC4Q9Y5F7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.76■■■□□ 2.51
PCDHGC4Q9Y5F7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.73■■■□□ 2.51
PCDHGC4Q9Y5F7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCDHGC4Q9Y5F7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDHGC4Q9Y5F7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
PCDHGC4Q9Y5F7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
PCDHGC4Q9Y5F7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
PCDHGC4Q9Y5F7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.4■■■□□ 2.46
PCDHGC4Q9Y5F7 AC015813.7-201ENST00000623294 581 ntBASIC30.39■■■□□ 2.46
PCDHGC4Q9Y5F7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCDHGC4Q9Y5F7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
PCDHGC4Q9Y5F7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PCDHGC4Q9Y5F7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PCDHGC4Q9Y5F7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.1■■■□□ 2.41
PCDHGC4Q9Y5F7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.1■■■□□ 2.41
PCDHGC4Q9Y5F7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PCDHGC4Q9Y5F7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCDHGC4Q9Y5F7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PCDHGC4Q9Y5F7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.06■■■□□ 2.4
PCDHGC4Q9Y5F7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCDHGC4Q9Y5F7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30■■■□□ 2.39
PCDHGC4Q9Y5F7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
PCDHGC4Q9Y5F7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
PCDHGC4Q9Y5F7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
PCDHGC4Q9Y5F7 AC006077.2-201ENST00000623591 457 ntBASIC29.9■■■□□ 2.38
PCDHGC4Q9Y5F7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCDHGC4Q9Y5F7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PCDHGC4Q9Y5F7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
PCDHGC4Q9Y5F7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PCDHGC4Q9Y5F7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PCDHGC4Q9Y5F7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
PCDHGC4Q9Y5F7 ZNRF2P1-201ENST00000441407 443 ntBASIC29.77■■■□□ 2.36
PCDHGC4Q9Y5F7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
PCDHGC4Q9Y5F7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
PCDHGC4Q9Y5F7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCDHGC4Q9Y5F7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCDHGC4Q9Y5F7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.33
PCDHGC4Q9Y5F7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
PCDHGC4Q9Y5F7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.59■■■□□ 2.33
PCDHGC4Q9Y5F7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.58■■■□□ 2.33
PCDHGC4Q9Y5F7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
PCDHGC4Q9Y5F7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
PCDHGC4Q9Y5F7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCDHGC4Q9Y5F7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHGC4Q9Y5F7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHGC4Q9Y5F7 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.46■■■□□ 2.31
PCDHGC4Q9Y5F7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.3
PCDHGC4Q9Y5F7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHGC4Q9Y5F7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.37■■■□□ 2.29
PCDHGC4Q9Y5F7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHGC4Q9Y5F7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHGC4Q9Y5F7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDHGC4Q9Y5F7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.34■■■□□ 2.29
PCDHGC4Q9Y5F7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
PCDHGC4Q9Y5F7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PCDHGC4Q9Y5F7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
PCDHGC4Q9Y5F7 AC145285.7-201ENST00000614819 1539 ntBASIC29.28■■■□□ 2.28
PCDHGC4Q9Y5F7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms