Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.1□□□□□ -0.47
SEC22CQ9BRL7 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 AC026797.1-201ENST00000624837 2869 ntBASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 KRT18P3-201ENST00000451602 1288 ntBASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 MIR4453-201ENST00000584019 89 ntBASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 AC124319.4-201ENST00000622931 2161 ntBASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 AL138725.1-201ENST00000407347 1314 ntBASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SEC22CQ9BRL7 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SEC22CQ9BRL7 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
SEC22CQ9BRL7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
SEC22CQ9BRL7 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SEC22CQ9BRL7 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SEC22CQ9BRL7 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 NUS1P3-201ENST00000423502 862 ntBASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 RNA5SP416-201ENST00000516838 111 ntBASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 AC009955.4-201ENST00000597192 544 ntBASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 PRSS30P-206ENST00000641773 873 ntBASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms