RNA–Protein interactions for RNA: ENST00000591287.5

CELF4-218, Transcript of CUGBP Elav-like family member 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-218ENST00000591287 NISCHQ9Y2I1 1504 aa25.32■■□□□ 1.64
CELF4-218ENST00000591287 CCDC180Q9P1Z9 1646 aa22.42■■□□□ 1.18
CELF4-218ENST00000591287 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
CELF4-218ENST00000591287 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.02
CELF4-218ENST00000591287 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
CELF4-218ENST00000591287 PCGF6Q9BYE7 350 aa21.4■■□□□ 1.02
CELF4-218ENST00000591287 DCAF1Q9Y4B6 1507 aa21.36■■□□□ 1.01
CELF4-218ENST00000591287 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
CELF4-218ENST00000591287 HRCP23327 699 aa21.34■■□□□ 1.01
CELF4-218ENST00000591287 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
CELF4-218ENST00000591287 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
CELF4-218ENST00000591287 PELP1Q8IZL8 1130 aaKnown RBP20.67■□□□□ 0.9
CELF4-218ENST00000591287 NACADO15069 1562 aa20.58■□□□□ 0.89
CELF4-218ENST00000591287 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
CELF4-218ENST00000591287 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
CELF4-218ENST00000591287 EHMT2Q96KQ7 1210 aa20.47■□□□□ 0.87
CELF4-218ENST00000591287 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
CELF4-218ENST00000591287 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
CELF4-218ENST00000591287 RB1CC1Q8TDY2 1594 aa20.22■□□□□ 0.83
CELF4-218ENST00000591287 UNC13AQ9UPW8 1703 aa20.18■□□□□ 0.82
CELF4-218ENST00000591287 FAM9AQ8IZU1 332 aaPredicted RBP20.14■□□□□ 0.81
CELF4-218ENST00000591287 ABCC9O60706 1549 aa20.12■□□□□ 0.81
CELF4-218ENST00000591287 ZEB1P37275 1124 aaPredicted RBP20.05■□□□□ 0.8
CELF4-218ENST00000591287 SCRIBQ14160 1630 aa19.97■□□□□ 0.79
CELF4-218ENST00000591287 GTF3C3Q9Y5Q9 886 aa19.94■□□□□ 0.78
CELF4-218ENST00000591287 TTBK1Q5TCY1 1321 aaPredicted RBP19.91■□□□□ 0.78
CELF4-218ENST00000591287 NEUROD1Q13562 356 aa19.88■□□□□ 0.77
CELF4-218ENST00000591287 YTHDC1Q96MU7 727 aaKnown RBP19.88■□□□□ 0.77
CELF4-218ENST00000591287 BICRAQ9NZM4 1560 aa19.84■□□□□ 0.77
CELF4-218ENST00000591287 MYT1Q01538 1121 aa19.83■□□□□ 0.77
CELF4-218ENST00000591287 ACIN1Q9UKV3 1341 aaKnown RBP19.83■□□□□ 0.76
CELF4-218ENST00000591287 CENPBP07199 599 aaPredicted RBP19.82■□□□□ 0.76
CELF4-218ENST00000591287 CCER1Q8TC90 406 aaPredicted RBP19.82■□□□□ 0.76
CELF4-218ENST00000591287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
CELF4-218ENST00000591287 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
CELF4-218ENST00000591287 DIEXFQ68CQ4 756 aaKnown RBP19.64■□□□□ 0.74
CELF4-218ENST00000591287 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
CELF4-218ENST00000591287 RSF1Q96T23 1441 aaPredicted RBP19.54■□□□□ 0.72
CELF4-218ENST00000591287 BAZ1AQ9NRL2 1556 aaPredicted RBP19.52■□□□□ 0.71
CELF4-218ENST00000591287 SMARCA4P51532 1647 aa19.49■□□□□ 0.71
CELF4-218ENST00000591287 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
CELF4-218ENST00000591287 CECR2Q9BXF3 1484 aa19.41■□□□□ 0.7
CELF4-218ENST00000591287 EIF4G1Q04637 1599 aaKnown RBP19.38■□□□□ 0.69
CELF4-218ENST00000591287 WIZO95785 1651 aa19.32■□□□□ 0.68
CELF4-218ENST00000591287 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.67
CELF4-218ENST00000591287 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
CELF4-218ENST00000591287 MIER1Q8N108 512 aa19.09■□□□□ 0.65
CELF4-218ENST00000591287 ZNF316A6NFI3 1004 aaPredicted RBP19.09■□□□□ 0.65
CELF4-218ENST00000591287 HMGXB3Q12766 1538 aa19.06■□□□□ 0.64
CELF4-218ENST00000591287 HNRNPUL2Q1KMD3 747 aaKnown RBP19.03■□□□□ 0.64
CELF4-218ENST00000591287 ATAD2BQ9ULI0 1458 aa18.98■□□□□ 0.63
CELF4-218ENST00000591287 BCANQ96GW7 911 aa18.96■□□□□ 0.63
CELF4-218ENST00000591287 RANGAP1P46060 587 aaPredicted RBP18.94■□□□□ 0.62
CELF4-218ENST00000591287 NCAPD3P42695 1498 aa18.92■□□□□ 0.62
CELF4-218ENST00000591287 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
CELF4-218ENST00000591287 UBTFP17480 764 aaKnown RBP18.87■□□□□ 0.61
CELF4-218ENST00000591287 BCL11AQ9H165 835 aa18.86■□□□□ 0.61
CELF4-218ENST00000591287 CCDC88BA6NC98 1476 aa18.85■□□□□ 0.61
CELF4-218ENST00000591287 ANP32EQ9BTT0 268 aa18.74■□□□□ 0.59
CELF4-218ENST00000591287 APLP2Q06481 763 aa18.73■□□□□ 0.59
CELF4-218ENST00000591287 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
CELF4-218ENST00000591287 BAZ1BQ9UIG0 1483 aaKnown RBP18.69■□□□□ 0.58
CELF4-218ENST00000591287 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
CELF4-218ENST00000591287 PABPN1Q86U42 306 aaKnown RBP eCLIP18.67■□□□□ 0.58
CELF4-218ENST00000591287 CC2D2AQ9P2K1 1620 aa18.62■□□□□ 0.57
CELF4-218ENST00000591287 TSHZ2Q9NRE2 1034 aa18.62■□□□□ 0.57
CELF4-218ENST00000591287 BIVM-ERCC5R4GMW8 1640 aa18.59■□□□□ 0.57
CELF4-218ENST00000591287 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
CELF4-218ENST00000591287 FKBP8Q14318 412 aa18.54■□□□□ 0.56
CELF4-218ENST00000591287 ITGAEP38570 1179 aa18.53■□□□□ 0.56
CELF4-218ENST00000591287 NEFLP07196 543 aa18.51■□□□□ 0.55
CELF4-218ENST00000591287 CFTRP13569 1480 aa18.5■□□□□ 0.55
CELF4-218ENST00000591287 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
CELF4-218ENST00000591287 SYNJ1O43426 1573 aa18.4■□□□□ 0.54
CELF4-218ENST00000591287 KCNH8Q96L42 1107 aa18.39■□□□□ 0.54
CELF4-218ENST00000591287 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
CELF4-218ENST00000591287 TRIM52Q96A61 297 aa18.32■□□□□ 0.52
CELF4-218ENST00000591287 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
CELF4-218ENST00000591287 RBM19Q9Y4C8 960 aaKnown RBP18.29■□□□□ 0.52
CELF4-218ENST00000591287 LAMC3Q9Y6N6 1575 aa18.29■□□□□ 0.52
CELF4-218ENST00000591287 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
CELF4-218ENST00000591287 DDX10Q13206 875 aaKnown RBP18.25■□□□□ 0.51
CELF4-218ENST00000591287 EEA1Q15075 1411 aa18.25■□□□□ 0.51
CELF4-218ENST00000591287 CLSPNQ9HAW4 1339 aa18.25■□□□□ 0.51
CELF4-218ENST00000591287 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
CELF4-218ENST00000591287 WRNQ14191 1432 aaPredicted RBP eCLIP18.22■□□□□ 0.51
CELF4-218ENST00000591287 CUX1P39880 1505 aa18.22■□□□□ 0.51
CELF4-218ENST00000591287 KIF21BO75037 1637 aa18.21■□□□□ 0.51
CELF4-218ENST00000591287 WDR97A6NE52 1622 aa18.21■□□□□ 0.5
CELF4-218ENST00000591287 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
CELF4-218ENST00000591287 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
CELF4-218ENST00000591287 SOGA1O94964 1423 aa18.12■□□□□ 0.49
CELF4-218ENST00000591287 NBR1Q14596 966 aa18.11■□□□□ 0.49
CELF4-218ENST00000591287 DNMBPQ6XZF7 1577 aa18.08■□□□□ 0.49
CELF4-218ENST00000591287 CDK11AQ9UQ88 783 aaPredicted RBP18.08■□□□□ 0.49
CELF4-218ENST00000591287 ERICH3Q5RHP9 1530 aa18.04■□□□□ 0.48
CELF4-218ENST00000591287 CNGB1Q14028 1251 aaPredicted RBP18.04■□□□□ 0.48
CELF4-218ENST00000591287 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
CELF4-218ENST00000591287 KIF21AQ7Z4S6 1674 aa18.01■□□□□ 0.47
CELF4-218ENST00000591287 PRKCSHP14314 528 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms