RNA–Protein interactions for RNA: ENST00000348370.8

RNF111-201, Transcript of ring finger protein 111, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF111, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-201ENST00000348370 NISCHQ9Y2I1 1504 aa21.36■■□□□ 1.01
RNF111-201ENST00000348370 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
RNF111-201ENST00000348370 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
RNF111-201ENST00000348370 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
RNF111-201ENST00000348370 PELP1Q8IZL8 1130 aaKnown RBP20.68■□□□□ 0.9
RNF111-201ENST00000348370 PCGF6Q9BYE7 350 aa20.66■□□□□ 0.9
RNF111-201ENST00000348370 HRCP23327 699 aa20.34■□□□□ 0.85
RNF111-201ENST00000348370 MYT1Q01538 1121 aa20.25■□□□□ 0.83
RNF111-201ENST00000348370 EHMT2Q96KQ7 1210 aa20.14■□□□□ 0.81
RNF111-201ENST00000348370 PPARGC1BQ86YN6 1023 aaKnown RBP20.05■□□□□ 0.8
RNF111-201ENST00000348370 ZEB1P37275 1124 aaPredicted RBP20.03■□□□□ 0.8
RNF111-201ENST00000348370 CENPBP07199 599 aaPredicted RBP19.99■□□□□ 0.79
RNF111-201ENST00000348370 FAM9AQ8IZU1 332 aaPredicted RBP19.7■□□□□ 0.74
RNF111-201ENST00000348370 TRIM26Q12899 539 aaPredicted RBP19.68■□□□□ 0.74
RNF111-201ENST00000348370 CCER1Q8TC90 406 aaPredicted RBP19.66■□□□□ 0.74
RNF111-201ENST00000348370 YTHDC1Q96MU7 727 aaKnown RBP19.65■□□□□ 0.74
RNF111-201ENST00000348370 TTBK1Q5TCY1 1321 aaPredicted RBP19.63■□□□□ 0.73
RNF111-201ENST00000348370 CHIC1Q5VXU3 224 aa19.44■□□□□ 0.7
RNF111-201ENST00000348370 LOC105371045A0A1W2PR82 267 aa19.42■□□□□ 0.7
RNF111-201ENST00000348370 ERICH6Q7L0X2 663 aa19.38■□□□□ 0.69
RNF111-201ENST00000348370 TRIM41Q8WV44 630 aa19.32■□□□□ 0.68
RNF111-201ENST00000348370 GTF3C3Q9Y5Q9 886 aa19.27■□□□□ 0.67
RNF111-201ENST00000348370 APLP2Q06481 763 aa19.18■□□□□ 0.66
RNF111-201ENST00000348370 DIEXFQ68CQ4 756 aaKnown RBP19.15■□□□□ 0.66
RNF111-201ENST00000348370 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
RNF111-201ENST00000348370 ACIN1Q9UKV3 1341 aaKnown RBP19.1■□□□□ 0.65
RNF111-201ENST00000348370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
RNF111-201ENST00000348370 NEFLP07196 543 aa19.01■□□□□ 0.63
RNF111-201ENST00000348370 RANGAP1P46060 587 aaPredicted RBP18.85■□□□□ 0.61
RNF111-201ENST00000348370 NEUROD1Q13562 356 aa18.81■□□□□ 0.6
RNF111-201ENST00000348370 UBTFP17480 764 aaKnown RBP18.79■□□□□ 0.6
RNF111-201ENST00000348370 DCAF1Q9Y4B6 1507 aa18.78■□□□□ 0.6
RNF111-201ENST00000348370 MYO15BQ96JP2 1530 aa18.73■□□□□ 0.59
RNF111-201ENST00000348370 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
RNF111-201ENST00000348370 BCANQ96GW7 911 aa18.63■□□□□ 0.57
RNF111-201ENST00000348370 ZNF316A6NFI3 1004 aaPredicted RBP18.6■□□□□ 0.57
RNF111-201ENST00000348370 CCDC180Q9P1Z9 1646 aa18.46■□□□□ 0.55
RNF111-201ENST00000348370 ITGAEP38570 1179 aa18.34■□□□□ 0.53
RNF111-201ENST00000348370 RTL5Q5HYW3 569 aaPredicted RBP18.34■□□□□ 0.53
RNF111-201ENST00000348370 ATP1B4Q9UN42 357 aaPredicted RBP18.31■□□□□ 0.52
RNF111-201ENST00000348370 CLSPNQ9HAW4 1339 aa18.23■□□□□ 0.51
RNF111-201ENST00000348370 CDK11AQ9UQ88 783 aaPredicted RBP18.22■□□□□ 0.51
RNF111-201ENST00000348370 ANP32EQ9BTT0 268 aa18.22■□□□□ 0.51
RNF111-201ENST00000348370 MIER1Q8N108 512 aa18.21■□□□□ 0.51
RNF111-201ENST00000348370 FKBP8Q14318 412 aa18.17■□□□□ 0.5
RNF111-201ENST00000348370 DAXXQ9UER7 740 aaPredicted RBP18.16■□□□□ 0.5
RNF111-201ENST00000348370 BCL11AQ9H165 835 aa18.15■□□□□ 0.5
RNF111-201ENST00000348370 CNGB1Q14028 1251 aaPredicted RBP18.03■□□□□ 0.48
RNF111-201ENST00000348370 ANP32CO43423 234 aa18.02■□□□□ 0.48
RNF111-201ENST00000348370 POLR3GLQ9BT43 218 aa17.98■□□□□ 0.47
RNF111-201ENST00000348370 ZCCHC6Q5VYS8 1495 aaKnown RBP17.94■□□□□ 0.46
RNF111-201ENST00000348370 SUPT16HQ9Y5B9 1047 aaKnown RBP17.92■□□□□ 0.46
RNF111-201ENST00000348370 NBR1Q14596 966 aa17.9■□□□□ 0.46
RNF111-201ENST00000348370 MYT1LQ9UL68 1186 aa17.88■□□□□ 0.45
RNF111-201ENST00000348370 ANP32AP39687 249 aaKnown RBP17.85■□□□□ 0.45
RNF111-201ENST00000348370 EIF5BO60841 1220 aaKnown RBP17.85■□□□□ 0.45
RNF111-201ENST00000348370 FAM50AQ14320 339 aaKnown RBP17.82■□□□□ 0.44
RNF111-201ENST00000348370 TRIM52Q96A61 297 aa17.79■□□□□ 0.44
RNF111-201ENST00000348370 CSRNP3Q8WYN3 585 aa17.77■□□□□ 0.44
RNF111-201ENST00000348370 NPM2Q86SE8 214 aaKnown RBP17.77■□□□□ 0.44
RNF111-201ENST00000348370 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
RNF111-201ENST00000348370 IRX6P78412 446 aaPredicted RBP17.73■□□□□ 0.43
RNF111-201ENST00000348370 HNRNPUQ00839 825 aaKnown RBP eCLIP17.69■□□□□ 0.42
RNF111-201ENST00000348370 TSHZ2Q9NRE2 1034 aa17.68■□□□□ 0.42
RNF111-201ENST00000348370 ZBTB47Q9UFB7 747 aaPredicted RBP17.61■□□□□ 0.41
RNF111-201ENST00000348370 RBM19Q9Y4C8 960 aaKnown RBP17.59■□□□□ 0.41
RNF111-201ENST00000348370 RTN4Q9NQC3 1192 aaKnown RBP17.54■□□□□ 0.4
RNF111-201ENST00000348370 CEP162Q5TB80 1403 aa17.54■□□□□ 0.4
RNF111-201ENST00000348370 DEKP35659 375 aaKnown RBP17.53■□□□□ 0.4
RNF111-201ENST00000348370 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
RNF111-201ENST00000348370 FAM9BQ8IZU0 186 aa17.51■□□□□ 0.39
RNF111-201ENST00000348370 HIRIP3Q9BW71 556 aaPredicted RBP17.51■□□□□ 0.39
RNF111-201ENST00000348370 GLIPR1L2Q4G1C9 344 aa17.47■□□□□ 0.39
RNF111-201ENST00000348370 CCDC136Q96JN2 1154 aa17.46■□□□□ 0.39
RNF111-201ENST00000348370 NOP58Q9Y2X3 529 aaKnown RBP17.42■□□□□ 0.38
RNF111-201ENST00000348370 TONSLQ96HA7 1378 aa17.41■□□□□ 0.38
RNF111-201ENST00000348370 ZNF326Q5BKZ1 582 aaKnown RBP17.39■□□□□ 0.37
RNF111-201ENST00000348370 RSF1Q96T23 1441 aaPredicted RBP17.37■□□□□ 0.37
RNF111-201ENST00000348370 CLIP1P30622 1438 aa17.33■□□□□ 0.37
RNF111-201ENST00000348370 MRS2Q9HD23 443 aa17.29■□□□□ 0.36
RNF111-201ENST00000348370 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
RNF111-201ENST00000348370 LAS1LQ9Y4W2 734 aaKnown RBP17.29■□□□□ 0.36
RNF111-201ENST00000348370 ARXQ96QS3 562 aa17.29■□□□□ 0.36
RNF111-201ENST00000348370 GOLGA3Q08378 1498 aa17.28■□□□□ 0.36
RNF111-201ENST00000348370 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
RNF111-201ENST00000348370 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.26■□□□□ 0.35
RNF111-201ENST00000348370 NEFMP07197 916 aa17.25■□□□□ 0.35
RNF111-201ENST00000348370 P3H3Q8IVL6 736 aa17.25■□□□□ 0.35
RNF111-201ENST00000348370 B4GALNT3Q6L9W6 998 aa17.25■□□□□ 0.35
RNF111-201ENST00000348370 SALL2Q9Y467 1007 aaPredicted RBP17.22■□□□□ 0.35
RNF111-201ENST00000348370 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
RNF111-201ENST00000348370 CANXP27824 592 aaKnown RBP17.18■□□□□ 0.34
RNF111-201ENST00000348370 DDRGK1Q96HY6 314 aa17.17■□□□□ 0.34
RNF111-201ENST00000348370 KCNH8Q96L42 1107 aa17.16■□□□□ 0.34
RNF111-201ENST00000348370 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
RNF111-201ENST00000348370 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
RNF111-201ENST00000348370 ABCC9O60706 1549 aa17.14■□□□□ 0.33
RNF111-201ENST00000348370 SIN3AQ96ST3 1273 aa17.13■□□□□ 0.33
RNF111-201ENST00000348370 EEA1Q15075 1411 aa17.13■□□□□ 0.33
RNF111-201ENST00000348370 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms