Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 AC005586.2-201ENST00000563946 837 ntBASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CMSS1Q9BQ75 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 INGX-202ENST00000489074 768 ntBASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 AC004233.3-201ENST00000607794 1269 ntBASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CMSS1Q9BQ75 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 USP17L6P-201ENST00000382470 1197 ntBASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 ELK1P1-201ENST00000485699 580 ntBASIC12.28□□□□□ -0.44
CMSS1Q9BQ75 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms