RNA–Protein interactions for RNA: ENST00000369022.6

SCML4-203, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 2 BASIC

Gene SCML4, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-203ENST00000369022 NISCHQ9Y2I1 1504 aa28.25■■■□□ 2.11
SCML4-203ENST00000369022 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
SCML4-203ENST00000369022 ZCCHC6Q5VYS8 1495 aaKnown RBP23.97■■□□□ 1.43
SCML4-203ENST00000369022 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
SCML4-203ENST00000369022 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
SCML4-203ENST00000369022 MYO15BQ96JP2 1530 aa23.41■■□□□ 1.34
SCML4-203ENST00000369022 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
SCML4-203ENST00000369022 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
SCML4-203ENST00000369022 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
SCML4-203ENST00000369022 HRCP23327 699 aa23.09■■□□□ 1.29
SCML4-203ENST00000369022 PCGF6Q9BYE7 350 aa22.87■■□□□ 1.25
SCML4-203ENST00000369022 ABCC9O60706 1549 aa22.71■■□□□ 1.23
SCML4-203ENST00000369022 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.22
SCML4-203ENST00000369022 PPARGC1BQ86YN6 1023 aaKnown RBP22.57■■□□□ 1.2
SCML4-203ENST00000369022 SCRIBQ14160 1630 aa22.48■■□□□ 1.19
SCML4-203ENST00000369022 RSF1Q96T23 1441 aaPredicted RBP22.43■■□□□ 1.18
SCML4-203ENST00000369022 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.18
SCML4-203ENST00000369022 RB1CC1Q8TDY2 1594 aa22.31■■□□□ 1.16
SCML4-203ENST00000369022 TRIM41Q8WV44 630 aa22.2■■□□□ 1.15
SCML4-203ENST00000369022 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
SCML4-203ENST00000369022 NACADO15069 1562 aa22.03■■□□□ 1.12
SCML4-203ENST00000369022 ZEB1P37275 1124 aaPredicted RBP22.02■■□□□ 1.12
SCML4-203ENST00000369022 CECR2Q9BXF3 1484 aa22.01■■□□□ 1.11
SCML4-203ENST00000369022 MROH2BQ7Z745 1585 aa21.98■■□□□ 1.11
SCML4-203ENST00000369022 WIZO95785 1651 aa21.92■■□□□ 1.1
SCML4-203ENST00000369022 EHMT2Q96KQ7 1210 aa21.84■■□□□ 1.09
SCML4-203ENST00000369022 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
SCML4-203ENST00000369022 EIF4G1Q04637 1599 aaKnown RBP21.77■■□□□ 1.08
SCML4-203ENST00000369022 TOP2AP11388 1531 aaKnown RBP21.56■■□□□ 1.04
SCML4-203ENST00000369022 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
SCML4-203ENST00000369022 SMARCA4P51532 1647 aa21.5■■□□□ 1.03
SCML4-203ENST00000369022 SMARCA2P51531 1590 aa21.46■■□□□ 1.03
SCML4-203ENST00000369022 SCAF1Q9H7N4 1312 aaKnown RBP21.45■■□□□ 1.02
SCML4-203ENST00000369022 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.02
SCML4-203ENST00000369022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.45■■□□□ 1.02
SCML4-203ENST00000369022 WRNQ14191 1432 aaPredicted RBP eCLIP21.41■■□□□ 1.02
SCML4-203ENST00000369022 UNC13AQ9UPW8 1703 aa21.4■■□□□ 1.02
SCML4-203ENST00000369022 CCER1Q8TC90 406 aaPredicted RBP21.4■■□□□ 1.02
SCML4-203ENST00000369022 CEP162Q5TB80 1403 aa21.36■■□□□ 1.01
SCML4-203ENST00000369022 PELP1Q8IZL8 1130 aaKnown RBP21.31■■□□□ 1
SCML4-203ENST00000369022 SOGA1O94964 1423 aa21.31■■□□□ 1
SCML4-203ENST00000369022 TNIKQ9UKE5 1360 aa21.29■■□□□ 1
SCML4-203ENST00000369022 EEA1Q15075 1411 aa21.25■□□□□ 0.99
SCML4-203ENST00000369022 TTBK1Q5TCY1 1321 aaPredicted RBP21.23■□□□□ 0.99
SCML4-203ENST00000369022 RUSC2Q8N2Y8 1516 aa21.21■□□□□ 0.99
SCML4-203ENST00000369022 BICRAQ9NZM4 1560 aa21.17■□□□□ 0.98
SCML4-203ENST00000369022 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
SCML4-203ENST00000369022 ACIN1Q9UKV3 1341 aaKnown RBP21.16■□□□□ 0.98
SCML4-203ENST00000369022 GOLGA3Q08378 1498 aa21.15■□□□□ 0.98
SCML4-203ENST00000369022 DIEXFQ68CQ4 756 aaKnown RBP21.14■□□□□ 0.97
SCML4-203ENST00000369022 UBTFP17480 764 aaKnown RBP21.11■□□□□ 0.97
SCML4-203ENST00000369022 NEUROD1Q13562 356 aa21.1■□□□□ 0.97
SCML4-203ENST00000369022 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
SCML4-203ENST00000369022 PEG3Q9GZU2 1588 aa21.05■□□□□ 0.96
SCML4-203ENST00000369022 KIF21BO75037 1637 aa21.01■□□□□ 0.95
SCML4-203ENST00000369022 SYNJ1O43426 1573 aa21.01■□□□□ 0.95
SCML4-203ENST00000369022 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
SCML4-203ENST00000369022 CENPBP07199 599 aaPredicted RBP20.99■□□□□ 0.95
SCML4-203ENST00000369022 ZNF316A6NFI3 1004 aaPredicted RBP20.92■□□□□ 0.94
SCML4-203ENST00000369022 GTF3C3Q9Y5Q9 886 aa20.91■□□□□ 0.94
SCML4-203ENST00000369022 CLIP1P30622 1438 aa20.89■□□□□ 0.94
SCML4-203ENST00000369022 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
SCML4-203ENST00000369022 BAZ1BQ9UIG0 1483 aaKnown RBP20.85■□□□□ 0.93
SCML4-203ENST00000369022 ATAD2BQ9ULI0 1458 aa20.83■□□□□ 0.92
SCML4-203ENST00000369022 HNRNPUL2Q1KMD3 747 aaKnown RBP20.81■□□□□ 0.92
SCML4-203ENST00000369022 RAPGEF2Q9Y4G8 1499 aa20.79■□□□□ 0.92
SCML4-203ENST00000369022 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
SCML4-203ENST00000369022 APLP2Q06481 763 aa20.7■□□□□ 0.9
SCML4-203ENST00000369022 BIVM-ERCC5R4GMW8 1640 aa20.68■□□□□ 0.9
SCML4-203ENST00000369022 YTHDC1Q96MU7 727 aaKnown RBP20.66■□□□□ 0.9
SCML4-203ENST00000369022 MIER1Q8N108 512 aa20.65■□□□□ 0.9
SCML4-203ENST00000369022 RANGAP1P46060 587 aaPredicted RBP20.62■□□□□ 0.89
SCML4-203ENST00000369022 ERICH3Q5RHP9 1530 aa20.61■□□□□ 0.89
SCML4-203ENST00000369022 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
SCML4-203ENST00000369022 PRXQ9BXM0 1461 aa20.55■□□□□ 0.88
SCML4-203ENST00000369022 DHX57Q6P158 1386 aaKnown RBP20.49■□□□□ 0.87
SCML4-203ENST00000369022 CLSPNQ9HAW4 1339 aa20.48■□□□□ 0.87
SCML4-203ENST00000369022 CUX1P39880 1505 aa20.45■□□□□ 0.86
SCML4-203ENST00000369022 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
SCML4-203ENST00000369022 KANK4Q5T7N3 995 aaPredicted RBP20.42■□□□□ 0.86
SCML4-203ENST00000369022 RRBP1Q9P2E9 1410 aaKnown RBP20.4■□□□□ 0.86
SCML4-203ENST00000369022 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
SCML4-203ENST00000369022 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
SCML4-203ENST00000369022 CUX2O14529 1486 aa20.34■□□□□ 0.85
SCML4-203ENST00000369022 ARHGAP35Q9NRY4 1499 aa20.33■□□□□ 0.84
SCML4-203ENST00000369022 MYT1Q01538 1121 aa20.29■□□□□ 0.84
SCML4-203ENST00000369022 CFTRP13569 1480 aa20.28■□□□□ 0.84
SCML4-203ENST00000369022 CCNB3Q8WWL7 1395 aa20.28■□□□□ 0.84
SCML4-203ENST00000369022 PRDM2Q13029 1718 aa20.26■□□□□ 0.83
SCML4-203ENST00000369022 TIAM1Q13009 1591 aa20.19■□□□□ 0.82
SCML4-203ENST00000369022 CC2D2AQ9P2K1 1620 aa20.16■□□□□ 0.82
SCML4-203ENST00000369022 ITGAEP38570 1179 aa20.15■□□□□ 0.82
SCML4-203ENST00000369022 MAPKBP1O60336 1514 aa20.15■□□□□ 0.82
SCML4-203ENST00000369022 MAP3K1Q13233 1512 aa20.15■□□□□ 0.82
SCML4-203ENST00000369022 RAB3GAP2Q9H2M9 1393 aa20.14■□□□□ 0.81
SCML4-203ENST00000369022 IGF1RP08069 1367 aa20.11■□□□□ 0.81
SCML4-203ENST00000369022 SUPT16HQ9Y5B9 1047 aaKnown RBP20.1■□□□□ 0.81
SCML4-203ENST00000369022 LRRC9Q6ZRR7 1453 aa20.07■□□□□ 0.8
SCML4-203ENST00000369022 CFAP43Q8NDM7 1665 aa20.06■□□□□ 0.8
SCML4-203ENST00000369022 SETD5Q9C0A6 1442 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms