Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 IMP3P2-201ENST00000489760 475 ntBASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 AL132994.2-201ENST00000603120 687 ntBASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 AL157813.1-201ENST00000612996 587 ntBASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 AHCYP4-201ENST00000419201 1315 ntBASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 AC016700.1-201ENST00000429424 312 ntBASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 RCC2P8-201ENST00000502779 1035 ntBASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 MIR5572-201ENST00000583188 137 ntBASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 AC138649.2-201ENST00000615886 705 ntBASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 AC090386.2-201ENST00000623010 1039 ntBASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CUEDC1Q9NWM3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms