RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 AEBP2Q6ZN18 517 aaPredicted RBP38.81■■■■□ 3.8
LINC01090-202ENST00000434418 CHIC1Q5VXU3 224 aa37.9■■■■□ 3.66
LINC01090-202ENST00000434418 PHF23Q9BUL5 403 aaPredicted RBP33.42■■■□□ 2.94
LINC01090-202ENST00000434418 SENP3Q9H4L4 574 aaPredicted RBP32.77■■■□□ 2.84
LINC01090-202ENST00000434418 PLPPR3Q6T4P5 718 aa30.77■■■□□ 2.52
LINC01090-202ENST00000434418 FOXD1Q16676 465 aa30.5■■■□□ 2.47
LINC01090-202ENST00000434418 PPP6R1Q9UPN7 881 aa29.47■■■□□ 2.31
LINC01090-202ENST00000434418 ADRA2BP18089 450 aa29.44■■■□□ 2.3
LINC01090-202ENST00000434418 PIAS4Q8N2W9 510 aaPredicted RBP28.77■■■□□ 2.2
LINC01090-202ENST00000434418 MSH5O43196 834 aa27.96■■■□□ 2.07
LINC01090-202ENST00000434418 PPP4R3CPQ6ZMV5 832 aa27.18■■□□□ 1.94
LINC01090-202ENST00000434418 SCAF1Q9H7N4 1312 aaKnown RBP26.73■■□□□ 1.87
LINC01090-202ENST00000434418 KCNA4P22459 653 aa26.73■■□□□ 1.87
LINC01090-202ENST00000434418 MAPK8IP2Q13387 824 aaPredicted RBP26.71■■□□□ 1.87
LINC01090-202ENST00000434418 NCBP3Q53F19 620 aaKnown RBP26.38■■□□□ 1.81
LINC01090-202ENST00000434418 CNKSR2Q8WXI2 1034 aa26.34■■□□□ 1.81
LINC01090-202ENST00000434418 DMRT2Q9Y5R5 561 aa26.21■■□□□ 1.79
LINC01090-202ENST00000434418 NPM3O75607 178 aaKnown RBP26.14■■□□□ 1.78
LINC01090-202ENST00000434418 RNF216Q9NWF9 866 aaPredicted RBP25.79■■□□□ 1.72
LINC01090-202ENST00000434418 HOXD11P31277 338 aaPredicted RBP25.68■■□□□ 1.7
LINC01090-202ENST00000434418 POTEDQ86YR6 584 aa25.41■■□□□ 1.66
LINC01090-202ENST00000434418 SLC4A1APQ9BWU0 796 aaKnown RBP25.41■■□□□ 1.66
LINC01090-202ENST00000434418 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
LINC01090-202ENST00000434418 DCAF8L1A6NGE4 600 aa25.12■■□□□ 1.61
LINC01090-202ENST00000434418 EHMT2Q96KQ7 1210 aa24.89■■□□□ 1.58
LINC01090-202ENST00000434418 SLC4A2P04920 1241 aa24.69■■□□□ 1.54
LINC01090-202ENST00000434418 ZBTB22O15209 634 aa24.65■■□□□ 1.54
LINC01090-202ENST00000434418 NISCHQ9Y2I1 1504 aa24.62■■□□□ 1.53
LINC01090-202ENST00000434418 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
LINC01090-202ENST00000434418 FOXD4L1Q9NU39 408 aa24.5■■□□□ 1.51
LINC01090-202ENST00000434418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.49■■□□□ 1.51
LINC01090-202ENST00000434418 U3KPZ7 1027 aaPredicted RBP24.17■■□□□ 1.46
LINC01090-202ENST00000434418 MYCNP04198 464 aaPredicted RBP24.08■■□□□ 1.45
LINC01090-202ENST00000434418 RNF39Q9H2S5 420 aa24.04■■□□□ 1.44
LINC01090-202ENST00000434418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
LINC01090-202ENST00000434418 HNRNPUL2Q1KMD3 747 aaKnown RBP23.72■■□□□ 1.39
LINC01090-202ENST00000434418 C1QBPQ07021 282 aaKnown RBP23.69■■□□□ 1.38
LINC01090-202ENST00000434418 SAMD1Q6SPF0 538 aaPredicted RBP23.69■■□□□ 1.38
LINC01090-202ENST00000434418 ATF5Q9Y2D1 282 aaPredicted RBP23.57■■□□□ 1.36
LINC01090-202ENST00000434418 ATXN8OSP0DMR3 200 aa23.53■■□□□ 1.36
LINC01090-202ENST00000434418 SPINK5Q9NQ38 1064 aaPredicted RBP23.5■■□□□ 1.35
LINC01090-202ENST00000434418 APLP2Q06481 763 aa23.41■■□□□ 1.34
LINC01090-202ENST00000434418 CAPN15O75808 1086 aa23.33■■□□□ 1.33
LINC01090-202ENST00000434418 CACNB1Q02641 598 aaPredicted RBP23.33■■□□□ 1.33
LINC01090-202ENST00000434418 TRHP20396 242 aaPredicted RBP23.27■■□□□ 1.32
LINC01090-202ENST00000434418 ZNF219Q9P2Y4 722 aaPredicted RBP23.17■■□□□ 1.3
LINC01090-202ENST00000434418 ABCB7O75027 752 aa22.98■■□□□ 1.27
LINC01090-202ENST00000434418 DSG3P32926 999 aa22.92■■□□□ 1.26
LINC01090-202ENST00000434418 POLA2Q14181 598 aa22.9■■□□□ 1.26
LINC01090-202ENST00000434418 MKRN4PQ13434 485 aaPredicted RBP22.52■■□□□ 1.2
LINC01090-202ENST00000434418 FBLN2P98095 1184 aa22.4■■□□□ 1.18
LINC01090-202ENST00000434418 ZBTB12Q9Y330 459 aaPredicted RBP22.4■■□□□ 1.18
LINC01090-202ENST00000434418 OSCARQ8IYS5 282 aa22.18■■□□□ 1.14
LINC01090-202ENST00000434418 FKBP8Q14318 412 aa22.16■■□□□ 1.14
LINC01090-202ENST00000434418 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
LINC01090-202ENST00000434418 ABCC9O60706 1549 aa22.03■■□□□ 1.12
LINC01090-202ENST00000434418 SPDYE4A6NLX3 237 aa21.99■■□□□ 1.11
LINC01090-202ENST00000434418 SPDYE2BA6NHP3 402 aa21.86■■□□□ 1.09
LINC01090-202ENST00000434418 SPDYE6P0CI01 402 aa21.86■■□□□ 1.09
LINC01090-202ENST00000434418 SPDYE2Q495Y8 402 aa21.86■■□□□ 1.09
LINC01090-202ENST00000434418 ZNF692Q9BU19 519 aaPredicted RBP21.82■■□□□ 1.08
LINC01090-202ENST00000434418 SSUH2Q9Y2M2 353 aa21.75■■□□□ 1.07
LINC01090-202ENST00000434418 RBM42Q9BTD8 480 aaKnown RBP21.74■■□□□ 1.07
LINC01090-202ENST00000434418 PROM2Q8N271 834 aa21.63■■□□□ 1.05
LINC01090-202ENST00000434418 PABPN1Q86U42 306 aaKnown RBP eCLIP21.58■■□□□ 1.05
LINC01090-202ENST00000434418 AKT1S1Q96B36 256 aa21.52■■□□□ 1.04
LINC01090-202ENST00000434418 REM2Q8IYK8 340 aaPredicted RBP21.37■■□□□ 1.01
LINC01090-202ENST00000434418 FBXO3Q9UK99 471 aa21.2■□□□□ 0.98
LINC01090-202ENST00000434418 SPDYE1Q8NFV5 336 aaPredicted RBP21.19■□□□□ 0.98
LINC01090-202ENST00000434418 PITPNM1O00562 1244 aa21.17■□□□□ 0.98
LINC01090-202ENST00000434418 CLEC11AQ9Y240 323 aa21.17■□□□□ 0.98
LINC01090-202ENST00000434418 STAG3Q9UJ98 1225 aa21.11■□□□□ 0.97
LINC01090-202ENST00000434418 VASPP50552 380 aaPredicted RBP21.02■□□□□ 0.96
LINC01090-202ENST00000434418 RB1CC1Q8TDY2 1594 aa20.96■□□□□ 0.95
LINC01090-202ENST00000434418 PRR29P0C7W0 189 aa20.93■□□□□ 0.94
LINC01090-202ENST00000434418 CHRDL2Q6WN34 429 aa20.88■□□□□ 0.93
LINC01090-202ENST00000434418 NACADO15069 1562 aa20.82■□□□□ 0.92
LINC01090-202ENST00000434418 MIER1Q8N108 512 aa20.82■□□□□ 0.92
LINC01090-202ENST00000434418 PLCD3Q8N3E9 789 aa20.81■□□□□ 0.92
LINC01090-202ENST00000434418 DCAF8L2P0C7V8 631 aa20.78■□□□□ 0.92
LINC01090-202ENST00000434418 IFNLR1Q8IU57 520 aaPredicted RBP20.77■□□□□ 0.92
LINC01090-202ENST00000434418 CREBZFQ9NS37 354 aa20.76■□□□□ 0.91
LINC01090-202ENST00000434418 CHADLQ6NUI6 762 aa20.71■□□□□ 0.91
LINC01090-202ENST00000434418 FXR2P51116 673 aaKnown RBP eCLIP20.7■□□□□ 0.9
LINC01090-202ENST00000434418 PIP4P2Q8N4L2 257 aa20.67■□□□□ 0.9
LINC01090-202ENST00000434418 PRKAR2AP13861 404 aaKnown RBP20.62■□□□□ 0.89
LINC01090-202ENST00000434418 PLEKHG5O94827 1062 aa20.61■□□□□ 0.89
LINC01090-202ENST00000434418 KLHL34Q8N239 644 aa20.61■□□□□ 0.89
LINC01090-202ENST00000434418 MNX1P50219 401 aaPredicted RBP20.56■□□□□ 0.88
LINC01090-202ENST00000434418 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
LINC01090-202ENST00000434418 MYO15BQ96JP2 1530 aa20.51■□□□□ 0.87
LINC01090-202ENST00000434418 ZBTB47Q9UFB7 747 aaPredicted RBP20.46■□□□□ 0.87
LINC01090-202ENST00000434418 SPOCK2Q92563 424 aa20.44■□□□□ 0.86
LINC01090-202ENST00000434418 FARP1Q9Y4F1 1045 aaPredicted RBP20.44■□□□□ 0.86
LINC01090-202ENST00000434418 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
LINC01090-202ENST00000434418 BICRAQ9NZM4 1560 aa20.38■□□□□ 0.85
LINC01090-202ENST00000434418 RTN4Q9NQC3 1192 aaKnown RBP20.36■□□□□ 0.85
LINC01090-202ENST00000434418 NUBP1P53384 320 aa20.32■□□□□ 0.84
LINC01090-202ENST00000434418 NPM1P06748 294 aaKnown RBP eCLIP20.3■□□□□ 0.84
LINC01090-202ENST00000434418 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms