Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 LINC01230-201ENST00000625222 3017 ntBASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
PARPBPQ9NWS1 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
PARPBPQ9NWS1 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
PARPBPQ9NWS1 MBLAC2-202ENST00000514906 1936 ntBASIC12.9□□□□□ -0.35
PARPBPQ9NWS1 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
PARPBPQ9NWS1 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
PARPBPQ9NWS1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
PARPBPQ9NWS1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
PARPBPQ9NWS1 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 AL161932.2-201ENST00000435436 679 ntBASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 ST13P19-201ENST00000442505 1124 ntBASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 AC104073.2-201ENST00000453737 312 ntBASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 SCARNA21-201ENST00000517026 139 ntBASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 AC140658.4-201ENST00000561990 352 ntBASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 AC124068.2-201ENST00000569473 1109 ntBASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 AC020914.3-201ENST00000594712 304 ntBASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 AC138649.2-201ENST00000615886 705 ntBASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 AL591471.1-201ENST00000621855 229 ntBASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PARPBPQ9NWS1 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PARPBPQ9NWS1 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms