RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 NISCHQ9Y2I1 1504 aa35.07■■■■□ 3.21
SCARNA21-201ENST00000517026 CCDC180Q9P1Z9 1646 aa30.96■■■□□ 2.55
SCARNA21-201ENST00000517026 ABCC9O60706 1549 aa30.77■■■□□ 2.52
SCARNA21-201ENST00000517026 DCAF8L2P0C7V8 631 aa29.42■■■□□ 2.3
SCARNA21-201ENST00000517026 DNAJC5BQ9UF47 199 aa29.37■■■□□ 2.29
SCARNA21-201ENST00000517026 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
SCARNA21-201ENST00000517026 NACADO15069 1562 aa29.16■■■□□ 2.26
SCARNA21-201ENST00000517026 RB1CC1Q8TDY2 1594 aa29.15■■■□□ 2.26
SCARNA21-201ENST00000517026 MYO15BQ96JP2 1530 aa29■■■□□ 2.23
SCARNA21-201ENST00000517026 DCAF1Q9Y4B6 1507 aa28.95■■■□□ 2.23
SCARNA21-201ENST00000517026 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.17
SCARNA21-201ENST00000517026 UNC13AQ9UPW8 1703 aa28.55■■■□□ 2.16
SCARNA21-201ENST00000517026 BICRAQ9NZM4 1560 aa28.42■■■□□ 2.14
SCARNA21-201ENST00000517026 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
SCARNA21-201ENST00000517026 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.06
SCARNA21-201ENST00000517026 CC2D2AQ9P2K1 1620 aa27.82■■■□□ 2.04
SCARNA21-201ENST00000517026 CECR2Q9BXF3 1484 aa27.78■■■□□ 2.04
SCARNA21-201ENST00000517026 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
SCARNA21-201ENST00000517026 DNAJC5Q9H3Z4 198 aa27.2■■□□□ 1.94
SCARNA21-201ENST00000517026 SMARCA4P51532 1647 aa27.14■■□□□ 1.94
SCARNA21-201ENST00000517026 BAZ1AQ9NRL2 1556 aaPredicted RBP27.13■■□□□ 1.93
SCARNA21-201ENST00000517026 MROH2BQ7Z745 1585 aa27.07■■□□□ 1.92
SCARNA21-201ENST00000517026 ATAD2BQ9ULI0 1458 aa27.03■■□□□ 1.92
SCARNA21-201ENST00000517026 NCAPD3P42695 1498 aa26.98■■□□□ 1.91
SCARNA21-201ENST00000517026 SMARCA2P51531 1590 aa26.92■■□□□ 1.9
SCARNA21-201ENST00000517026 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
SCARNA21-201ENST00000517026 RSF1Q96T23 1441 aaPredicted RBP26.84■■□□□ 1.89
SCARNA21-201ENST00000517026 BAZ1BQ9UIG0 1483 aaKnown RBP26.79■■□□□ 1.88
SCARNA21-201ENST00000517026 HMGXB3Q12766 1538 aa26.78■■□□□ 1.88
SCARNA21-201ENST00000517026 WIZO95785 1651 aa26.73■■□□□ 1.87
SCARNA21-201ENST00000517026 CUX2O14529 1486 aa26.71■■□□□ 1.87
SCARNA21-201ENST00000517026 ERCC6Q03468 1493 aa26.51■■□□□ 1.83
SCARNA21-201ENST00000517026 TOP2AP11388 1531 aaKnown RBP26.45■■□□□ 1.83
SCARNA21-201ENST00000517026 NESP48681 1621 aa26.37■■□□□ 1.81
SCARNA21-201ENST00000517026 SUPT5HO00267 1087 aaKnown RBP26.37■■□□□ 1.81
SCARNA21-201ENST00000517026 CADPSQ9ULU8 1353 aa26.23■■□□□ 1.79
SCARNA21-201ENST00000517026 CCDC88BA6NC98 1476 aa26.21■■□□□ 1.79
SCARNA21-201ENST00000517026 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.78
SCARNA21-201ENST00000517026 LAMC3Q9Y6N6 1575 aa26.16■■□□□ 1.78
SCARNA21-201ENST00000517026 CFTRP13569 1480 aa26.07■■□□□ 1.76
SCARNA21-201ENST00000517026 PDS5BQ9NTI5 1447 aa26.05■■□□□ 1.76
SCARNA21-201ENST00000517026 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
SCARNA21-201ENST00000517026 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
SCARNA21-201ENST00000517026 CEP164Q9UPV0 1460 aa25.84■■□□□ 1.73
SCARNA21-201ENST00000517026 MRC2Q9UBG0 1479 aa25.78■■□□□ 1.72
SCARNA21-201ENST00000517026 WDR62O43379 1518 aa25.74■■□□□ 1.71
SCARNA21-201ENST00000517026 TRIM41Q8WV44 630 aa25.67■■□□□ 1.7
SCARNA21-201ENST00000517026 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
SCARNA21-201ENST00000517026 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
SCARNA21-201ENST00000517026 TOPBP1Q92547 1522 aa25.5■■□□□ 1.67
SCARNA21-201ENST00000517026 ABCC8Q09428 1581 aa25.44■■□□□ 1.66
SCARNA21-201ENST00000517026 DNMBPQ6XZF7 1577 aa25.43■■□□□ 1.66
SCARNA21-201ENST00000517026 OSCARQ8IYS5 282 aa25.39■■□□□ 1.66
SCARNA21-201ENST00000517026 CUX1P39880 1505 aa25.37■■□□□ 1.65
SCARNA21-201ENST00000517026 POLA1P09884 1462 aaPredicted RBP25.3■■□□□ 1.64
SCARNA21-201ENST00000517026 IFT140Q96RY7 1462 aa25.29■■□□□ 1.64
SCARNA21-201ENST00000517026 WRNQ14191 1432 aaPredicted RBP eCLIP25.28■■□□□ 1.64
SCARNA21-201ENST00000517026 FGD5Q6ZNL6 1462 aa25.27■■□□□ 1.64
SCARNA21-201ENST00000517026 RAD54L2Q9Y4B4 1467 aa25.25■■□□□ 1.63
SCARNA21-201ENST00000517026 SOGA1O94964 1423 aa25.24■■□□□ 1.63
SCARNA21-201ENST00000517026 ZNF608Q9ULD9 1512 aaPredicted RBP25.22■■□□□ 1.63
SCARNA21-201ENST00000517026 SYNJ1O43426 1573 aa25.17■■□□□ 1.62
SCARNA21-201ENST00000517026 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
SCARNA21-201ENST00000517026 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
SCARNA21-201ENST00000517026 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
SCARNA21-201ENST00000517026 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
SCARNA21-201ENST00000517026 TOP2BQ02880 1626 aa25.12■■□□□ 1.61
SCARNA21-201ENST00000517026 TDRD9Q8NDG6 1382 aaKnown RBP25.12■■□□□ 1.61
SCARNA21-201ENST00000517026 AQRO60306 1485 aaKnown RBP eCLIP25.12■■□□□ 1.61
SCARNA21-201ENST00000517026 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.61
SCARNA21-201ENST00000517026 ARHGEF11O15085 1522 aa25.02■■□□□ 1.6
SCARNA21-201ENST00000517026 EIF4G3O43432 1585 aaKnown RBP25.02■■□□□ 1.6
SCARNA21-201ENST00000517026 ABCA10Q8WWZ4 1543 aa25■■□□□ 1.59
SCARNA21-201ENST00000517026 WDR97A6NE52 1622 aa24.92■■□□□ 1.58
SCARNA21-201ENST00000517026 GAPVD1Q14C86 1478 aa24.91■■□□□ 1.58
SCARNA21-201ENST00000517026 GRIN2BQ13224 1484 aa24.89■■□□□ 1.57
SCARNA21-201ENST00000517026 SNAPC4Q5SXM2 1469 aa24.85■■□□□ 1.57
SCARNA21-201ENST00000517026 FBLN2P98095 1184 aa24.84■■□□□ 1.57
SCARNA21-201ENST00000517026 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.57
SCARNA21-201ENST00000517026 CYB5RLQ6IPT4 315 aa24.81■■□□□ 1.56
SCARNA21-201ENST00000517026 CHD1O14646 1710 aa24.8■■□□□ 1.56
SCARNA21-201ENST00000517026 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
SCARNA21-201ENST00000517026 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
SCARNA21-201ENST00000517026 CHMP7Q8WUX9 453 aaPredicted RBP24.76■■□□□ 1.55
SCARNA21-201ENST00000517026 KIF27Q86VH2 1401 aa24.73■■□□□ 1.55
SCARNA21-201ENST00000517026 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
SCARNA21-201ENST00000517026 SYNJ2O15056 1496 aa24.69■■□□□ 1.54
SCARNA21-201ENST00000517026 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
SCARNA21-201ENST00000517026 IGF1RP08069 1367 aa24.67■■□□□ 1.54
SCARNA21-201ENST00000517026 ERICH3Q5RHP9 1530 aa24.67■■□□□ 1.54
SCARNA21-201ENST00000517026 FHAD1B1AJZ9 1412 aa24.63■■□□□ 1.53
SCARNA21-201ENST00000517026 RUSC2Q8N2Y8 1516 aa24.62■■□□□ 1.53
SCARNA21-201ENST00000517026 ADAMTS12P58397 1594 aa24.61■■□□□ 1.53
SCARNA21-201ENST00000517026 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
SCARNA21-201ENST00000517026 TRHP20396 242 aaPredicted RBP24.56■■□□□ 1.52
SCARNA21-201ENST00000517026 GRIN2AQ12879 1464 aa24.56■■□□□ 1.52
SCARNA21-201ENST00000517026 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
SCARNA21-201ENST00000517026 NUP160Q12769 1436 aa24.45■■□□□ 1.51
SCARNA21-201ENST00000517026 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
SCARNA21-201ENST00000517026 CUL7Q14999 1698 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms