Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SSR1P43307 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
SSR1P43307 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.35■□□□□ 0.05
SSR1P43307 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SSR1P43307 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.35■□□□□ 0.05
SSR1P43307 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SSR1P43307 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
SSR1P43307 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.35■□□□□ 0.05
SSR1P43307 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.35■□□□□ 0.05
SSR1P43307 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
SSR1P43307 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
SSR1P43307 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.35■□□□□ 0.05
SSR1P43307 ALG3P1-201ENST00000508806 1114 ntBASIC15.35■□□□□ 0.05
SSR1P43307 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.35■□□□□ 0.05
SSR1P43307 AP003171.2-201ENST00000528208 925 ntBASIC15.35■□□□□ 0.05
SSR1P43307 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.35■□□□□ 0.05
SSR1P43307 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.35■□□□□ 0.05
SSR1P43307 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.35■□□□□ 0.05
SSR1P43307 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.35■□□□□ 0.05
SSR1P43307 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.35■□□□□ 0.05
SSR1P43307 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.35■□□□□ 0.05
SSR1P43307 AC006453.4-201ENST00000636949 1252 ntBASIC15.35■□□□□ 0.05
SSR1P43307 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
SSR1P43307 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
SSR1P43307 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 AL590440.2-201ENST00000641973 1595 ntBASIC15.35■□□□□ 0.05
SSR1P43307 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.35■□□□□ 0.05
SSR1P43307 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.35■□□□□ 0.05
SSR1P43307 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SSR1P43307 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.35■□□□□ 0.05
SSR1P43307 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SSR1P43307 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.35■□□□□ 0.05
SSR1P43307 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SSR1P43307 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SSR1P43307 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SSR1P43307 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
SSR1P43307 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.34■□□□□ 0.05
SSR1P43307 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.34■□□□□ 0.05
SSR1P43307 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.34■□□□□ 0.05
SSR1P43307 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.34■□□□□ 0.05
SSR1P43307 KRT90P-201ENST00000549264 1064 ntBASIC15.34■□□□□ 0.05
SSR1P43307 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.34■□□□□ 0.05
SSR1P43307 RN7SL713P-201ENST00000582127 302 ntBASIC15.34■□□□□ 0.05
SSR1P43307 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.34■□□□□ 0.05
SSR1P43307 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.34■□□□□ 0.05
SSR1P43307 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 CSPG4P11-201ENST00000560634 4910 ntBASIC15.34■□□□□ 0.05
SSR1P43307 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 KRT8P28-201ENST00000433288 1390 ntBASIC15.34■□□□□ 0.05
SSR1P43307 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.34■□□□□ 0.05
SSR1P43307 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
SSR1P43307 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SSR1P43307 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.34■□□□□ 0.05
SSR1P43307 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SSR1P43307 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms