RNA–Protein interactions for RNA: ENST00000507874.5

CLDND1-215, Transcript of claudin domain containing 1, humanhuman

TSL 3 BASIC

Gene CLDND1, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-215ENST00000507874 NISCHQ9Y2I1 1504 aa37.04■■■■□ 3.52
CLDND1-215ENST00000507874 CCDC180Q9P1Z9 1646 aa33.01■■■□□ 2.87
CLDND1-215ENST00000507874 ABCC9O60706 1549 aa32.46■■■□□ 2.79
CLDND1-215ENST00000507874 RB1CC1Q8TDY2 1594 aa31.13■■■□□ 2.57
CLDND1-215ENST00000507874 NACADO15069 1562 aa31.05■■■□□ 2.56
CLDND1-215ENST00000507874 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
CLDND1-215ENST00000507874 ZCCHC6Q5VYS8 1495 aaKnown RBP30.84■■■□□ 2.53
CLDND1-215ENST00000507874 MYO15BQ96JP2 1530 aa30.8■■■□□ 2.52
CLDND1-215ENST00000507874 DCAF1Q9Y4B6 1507 aa30.62■■■□□ 2.49
CLDND1-215ENST00000507874 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
CLDND1-215ENST00000507874 PABPN1Q86U42 306 aaKnown RBP eCLIP30.29■■■□□ 2.44
CLDND1-215ENST00000507874 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
CLDND1-215ENST00000507874 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
CLDND1-215ENST00000507874 DNAJC5BQ9UF47 199 aa29.95■■■□□ 2.39
CLDND1-215ENST00000507874 SHROOM4Q9ULL8 1493 aa29.83■■■□□ 2.37
CLDND1-215ENST00000507874 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
CLDND1-215ENST00000507874 CC2D2AQ9P2K1 1620 aa29.36■■■□□ 2.29
CLDND1-215ENST00000507874 CECR2Q9BXF3 1484 aa29.16■■■□□ 2.26
CLDND1-215ENST00000507874 SMARCA4P51532 1647 aa28.8■■■□□ 2.2
CLDND1-215ENST00000507874 BAZ1AQ9NRL2 1556 aaPredicted RBP28.71■■■□□ 2.19
CLDND1-215ENST00000507874 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
CLDND1-215ENST00000507874 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
CLDND1-215ENST00000507874 SMARCA2P51531 1590 aa28.61■■■□□ 2.17
CLDND1-215ENST00000507874 MROH2BQ7Z745 1585 aa28.57■■■□□ 2.16
CLDND1-215ENST00000507874 HMGXB3Q12766 1538 aa28.51■■■□□ 2.15
CLDND1-215ENST00000507874 PEG3Q9GZU2 1588 aa28.49■■■□□ 2.15
CLDND1-215ENST00000507874 BAZ1BQ9UIG0 1483 aaKnown RBP28.41■■■□□ 2.14
CLDND1-215ENST00000507874 WIZO95785 1651 aa28.27■■■□□ 2.12
CLDND1-215ENST00000507874 RSF1Q96T23 1441 aaPredicted RBP28.17■■■□□ 2.1
CLDND1-215ENST00000507874 NESP48681 1621 aa28.06■■■□□ 2.08
CLDND1-215ENST00000507874 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
CLDND1-215ENST00000507874 LAMC3Q9Y6N6 1575 aa27.93■■■□□ 2.06
CLDND1-215ENST00000507874 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
CLDND1-215ENST00000507874 CADPSQ9ULU8 1353 aa27.81■■■□□ 2.04
CLDND1-215ENST00000507874 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
CLDND1-215ENST00000507874 CUX2O14529 1486 aa27.73■■■□□ 2.03
CLDND1-215ENST00000507874 KIF21AQ7Z4S6 1674 aa27.73■■■□□ 2.03
CLDND1-215ENST00000507874 THOC2Q8NI27 1593 aaKnown RBP27.67■■■□□ 2.02
CLDND1-215ENST00000507874 CFTRP13569 1480 aa27.62■■■□□ 2.01
CLDND1-215ENST00000507874 CCDC88BA6NC98 1476 aa27.6■■■□□ 2.01
CLDND1-215ENST00000507874 FANCD2Q9BXW9 1451 aa27.5■■□□□ 1.99
CLDND1-215ENST00000507874 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
CLDND1-215ENST00000507874 MRC2Q9UBG0 1479 aa27.48■■□□□ 1.99
CLDND1-215ENST00000507874 PRDM2Q13029 1718 aa27.43■■□□□ 1.98
CLDND1-215ENST00000507874 WDR62O43379 1518 aa27.4■■□□□ 1.98
CLDND1-215ENST00000507874 SUPT5HO00267 1087 aaKnown RBP27.34■■□□□ 1.97
CLDND1-215ENST00000507874 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
CLDND1-215ENST00000507874 DNAJC5Q9H3Z4 198 aa27.06■■□□□ 1.92
CLDND1-215ENST00000507874 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
CLDND1-215ENST00000507874 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.91
CLDND1-215ENST00000507874 ABCC8Q09428 1581 aa27■■□□□ 1.91
CLDND1-215ENST00000507874 IFT140Q96RY7 1462 aa26.9■■□□□ 1.9
CLDND1-215ENST00000507874 ZNF608Q9ULD9 1512 aaPredicted RBP26.82■■□□□ 1.88
CLDND1-215ENST00000507874 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
CLDND1-215ENST00000507874 CUX1P39880 1505 aa26.81■■□□□ 1.88
CLDND1-215ENST00000507874 TARBP1Q13395 1621 aaKnown RBP26.78■■□□□ 1.88
CLDND1-215ENST00000507874 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
CLDND1-215ENST00000507874 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
CLDND1-215ENST00000507874 RAD54L2Q9Y4B4 1467 aa26.72■■□□□ 1.87
CLDND1-215ENST00000507874 SOGA1O94964 1423 aa26.69■■□□□ 1.86
CLDND1-215ENST00000507874 AQRO60306 1485 aaKnown RBP eCLIP26.64■■□□□ 1.861e-6■■■■□ 26.1
CLDND1-215ENST00000507874 TDRD9Q8NDG6 1382 aaKnown RBP26.57■■□□□ 1.84
CLDND1-215ENST00000507874 WRNQ14191 1432 aaPredicted RBP eCLIP26.55■■□□□ 1.84
CLDND1-215ENST00000507874 WDR97A6NE52 1622 aa26.55■■□□□ 1.84
CLDND1-215ENST00000507874 BIVM-ERCC5R4GMW8 1640 aa26.53■■□□□ 1.84
CLDND1-215ENST00000507874 OSCARQ8IYS5 282 aa26.53■■□□□ 1.84
CLDND1-215ENST00000507874 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
CLDND1-215ENST00000507874 TOP2BQ02880 1626 aa26.52■■□□□ 1.84
CLDND1-215ENST00000507874 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
CLDND1-215ENST00000507874 CHD1O14646 1710 aa26.43■■□□□ 1.82
CLDND1-215ENST00000507874 SNAPC4Q5SXM2 1469 aa26.4■■□□□ 1.82
CLDND1-215ENST00000507874 GRIN2BQ13224 1484 aa26.39■■□□□ 1.82
CLDND1-215ENST00000507874 GAPVD1Q14C86 1478 aa26.39■■□□□ 1.81
CLDND1-215ENST00000507874 ABCA5Q8WWZ7 1642 aa26.38■■□□□ 1.81
CLDND1-215ENST00000507874 PBRM1Q86U86 1689 aa26.37■■□□□ 1.81
CLDND1-215ENST00000507874 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
CLDND1-215ENST00000507874 FBLN2P98095 1184 aa26.33■■□□□ 1.81
CLDND1-215ENST00000507874 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
CLDND1-215ENST00000507874 CHMP7Q8WUX9 453 aaPredicted RBP26.22■■□□□ 1.79
CLDND1-215ENST00000507874 RIMBP3CA6NJZ7 1639 aa26.18■■□□□ 1.78
CLDND1-215ENST00000507874 RIMBP3BA6NNM3 1639 aa26.18■■□□□ 1.78
CLDND1-215ENST00000507874 RIMBP3Q9UFD9 1639 aa26.18■■□□□ 1.78
CLDND1-215ENST00000507874 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
CLDND1-215ENST00000507874 ARHGEF11O15085 1522 aa26.14■■□□□ 1.78
CLDND1-215ENST00000507874 ERICH3Q5RHP9 1530 aa26.13■■□□□ 1.77
CLDND1-215ENST00000507874 CLASP1Q7Z460 1538 aa26.12■■□□□ 1.77
CLDND1-215ENST00000507874 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
CLDND1-215ENST00000507874 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
CLDND1-215ENST00000507874 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
CLDND1-215ENST00000507874 KIF27Q86VH2 1401 aa25.99■■□□□ 1.75
CLDND1-215ENST00000507874 CEP170Q5SW79 1584 aa25.97■■□□□ 1.75
CLDND1-215ENST00000507874 NUP160Q12769 1436 aa25.96■■□□□ 1.75
CLDND1-215ENST00000507874 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
CLDND1-215ENST00000507874 IGF1RP08069 1367 aa25.92■■□□□ 1.74
CLDND1-215ENST00000507874 CYB5RLQ6IPT4 315 aa25.89■■□□□ 1.74
CLDND1-215ENST00000507874 CUL7Q14999 1698 aa25.87■■□□□ 1.73
CLDND1-215ENST00000507874 SHROOM2Q13796 1616 aa25.79■■□□□ 1.72
CLDND1-215ENST00000507874 ERCC6L2Q5T890 1561 aa25.77■■□□□ 1.72
CLDND1-215ENST00000507874 RUSC2Q8N2Y8 1516 aa25.77■■□□□ 1.72
CLDND1-215ENST00000507874 CARMIL1Q5VZK9 1371 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms