Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-AP01891 OR2I1P-208ENST00000641137 4948 ntBASIC12.16□□□□□ -0.46
HLA-AP01891 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
HLA-AP01891 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-AP01891 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 AC139712.1-201ENST00000378256 1875 ntBASIC12.16□□□□□ -0.46
HLA-AP01891 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-AP01891 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-AP01891 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-AP01891 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HLA-AP01891 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HLA-AP01891 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.16□□□□□ -0.46
HLA-AP01891 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HLA-AP01891 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-AP01891 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 AL359845.1-201ENST00000458202 1648 ntBASIC12.15□□□□□ -0.46
HLA-AP01891 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 AL022313.4-201ENST00000562756 2046 ntBASIC12.15□□□□□ -0.46
HLA-AP01891 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.15□□□□□ -0.46
HLA-AP01891 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.46
HLA-AP01891 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.15□□□□□ -0.46
HLA-AP01891 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.15□□□□□ -0.46
HLA-AP01891 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.15□□□□□ -0.46
HLA-AP01891 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.15□□□□□ -0.46
HLA-AP01891 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.15□□□□□ -0.46
HLA-AP01891 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.15□□□□□ -0.46
HLA-AP01891 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.15□□□□□ -0.46
HLA-AP01891 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.15□□□□□ -0.46
HLA-AP01891 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 Z98257.2-202ENST00000641138 1548 ntBASIC12.15□□□□□ -0.46
HLA-AP01891 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-AP01891 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
HLA-AP01891 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-AP01891 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
HLA-AP01891 AC011481.3-201ENST00000623895 5594 ntBASIC12.15□□□□□ -0.47
HLA-AP01891 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HLA-AP01891 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
HLA-AP01891 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HLA-AP01891 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.14□□□□□ -0.47
HLA-AP01891 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.14□□□□□ -0.47
HLA-AP01891 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
HLA-AP01891 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms