RNA–Protein interactions for RNA: ENST00000300481.13

TRPM2-201, Transcript of transient receptor potential cation channel subfamily M member 2, humanhuman

TSL 1 (best) BASIC

Gene TRPM2, Length 5,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM2-201ENST00000300481 DCAF8L2P0C7V8 631 aa21.95■■□□□ 1.1
TRPM2-201ENST00000300481 NISCHQ9Y2I1 1504 aa21.8■■□□□ 1.08
TRPM2-201ENST00000300481 PELP1Q8IZL8 1130 aaKnown RBP20.86■□□□□ 0.93
TRPM2-201ENST00000300481 SUPT5HO00267 1087 aaKnown RBP20.66■□□□□ 0.9
TRPM2-201ENST00000300481 SHROOM4Q9ULL8 1493 aa20.35■□□□□ 0.85
TRPM2-201ENST00000300481 MYT1Q01538 1121 aa20.3■□□□□ 0.84
TRPM2-201ENST00000300481 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
TRPM2-201ENST00000300481 CENPBP07199 599 aaPredicted RBP20.07■□□□□ 0.8
TRPM2-201ENST00000300481 PCGF6Q9BYE7 350 aa20.01■□□□□ 0.79
TRPM2-201ENST00000300481 ERICH6Q7L0X2 663 aa19.99■□□□□ 0.79
TRPM2-201ENST00000300481 ZEB1P37275 1124 aaPredicted RBP19.91■□□□□ 0.78
TRPM2-201ENST00000300481 CCER1Q8TC90 406 aaPredicted RBP19.86■□□□□ 0.77
TRPM2-201ENST00000300481 APLP2Q06481 763 aa19.79■□□□□ 0.76
TRPM2-201ENST00000300481 FAM9AQ8IZU1 332 aaPredicted RBP19.67■□□□□ 0.74
TRPM2-201ENST00000300481 TTBK1Q5TCY1 1321 aaPredicted RBP19.47■□□□□ 0.71
TRPM2-201ENST00000300481 NEFLP07196 543 aa19.44■□□□□ 0.7
TRPM2-201ENST00000300481 YTHDC1Q96MU7 727 aaKnown RBP19.39■□□□□ 0.69
TRPM2-201ENST00000300481 HRCP23327 699 aa19.3■□□□□ 0.68
TRPM2-201ENST00000300481 RANGAP1P46060 587 aaPredicted RBP19.25■□□□□ 0.67
TRPM2-201ENST00000300481 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
TRPM2-201ENST00000300481 ATP1B4Q9UN42 357 aaPredicted RBP19.13■□□□□ 0.65
TRPM2-201ENST00000300481 TRIM26Q12899 539 aaPredicted RBP19.11■□□□□ 0.65
TRPM2-201ENST00000300481 UBTFP17480 764 aaKnown RBP18.91■□□□□ 0.62
TRPM2-201ENST00000300481 ABCC9O60706 1549 aa18.89■□□□□ 0.61
TRPM2-201ENST00000300481 DAXXQ9UER7 740 aaPredicted RBP18.89■□□□□ 0.61
TRPM2-201ENST00000300481 PPARGC1BQ86YN6 1023 aaKnown RBP18.78■□□□□ 0.6
TRPM2-201ENST00000300481 RTL5Q5HYW3 569 aaPredicted RBP18.71■□□□□ 0.59
TRPM2-201ENST00000300481 DIEXFQ68CQ4 756 aaKnown RBP18.65■□□□□ 0.58
TRPM2-201ENST00000300481 MYT1LQ9UL68 1186 aa18.6■□□□□ 0.57
TRPM2-201ENST00000300481 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
TRPM2-201ENST00000300481 GTF3C3Q9Y5Q9 886 aa18.55■□□□□ 0.56
TRPM2-201ENST00000300481 LOC105371045A0A1W2PR82 267 aa18.49■□□□□ 0.55
TRPM2-201ENST00000300481 ZNF316A6NFI3 1004 aaPredicted RBP18.48■□□□□ 0.55
TRPM2-201ENST00000300481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.46■□□□□ 0.55
TRPM2-201ENST00000300481 HNRNPUL2Q1KMD3 747 aaKnown RBP18.46■□□□□ 0.55
TRPM2-201ENST00000300481 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
TRPM2-201ENST00000300481 POLR3GLQ9BT43 218 aa18.37■□□□□ 0.53
TRPM2-201ENST00000300481 ITGAEP38570 1179 aa18.36■□□□□ 0.53
TRPM2-201ENST00000300481 ACIN1Q9UKV3 1341 aaKnown RBP18.31■□□□□ 0.52
TRPM2-201ENST00000300481 BCANQ96GW7 911 aa18.29■□□□□ 0.52
TRPM2-201ENST00000300481 CDK11AQ9UQ88 783 aaPredicted RBP18.28■□□□□ 0.52
TRPM2-201ENST00000300481 CLSPNQ9HAW4 1339 aa18.25■□□□□ 0.51
TRPM2-201ENST00000300481 CCDC180Q9P1Z9 1646 aa18.22■□□□□ 0.51
TRPM2-201ENST00000300481 CNGB1Q14028 1251 aaPredicted RBP18.19■□□□□ 0.5
TRPM2-201ENST00000300481 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
TRPM2-201ENST00000300481 ANP32CO43423 234 aa18.06■□□□□ 0.48
TRPM2-201ENST00000300481 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
TRPM2-201ENST00000300481 ZCCHC6Q5VYS8 1495 aaKnown RBP18.04■□□□□ 0.48
TRPM2-201ENST00000300481 ANP32AP39687 249 aaKnown RBP18■□□□□ 0.47
TRPM2-201ENST00000300481 FBLN2P98095 1184 aa17.95■□□□□ 0.46
TRPM2-201ENST00000300481 EIF5BO60841 1220 aaKnown RBP17.95■□□□□ 0.46
TRPM2-201ENST00000300481 RB1CC1Q8TDY2 1594 aa17.92■□□□□ 0.46
TRPM2-201ENST00000300481 NEUROD1Q13562 356 aa17.9■□□□□ 0.46
TRPM2-201ENST00000300481 GLIPR1L2Q4G1C9 344 aa17.9■□□□□ 0.46
TRPM2-201ENST00000300481 FAM50AQ14320 339 aaKnown RBP17.85■□□□□ 0.45
TRPM2-201ENST00000300481 FKBP8Q14318 412 aa17.79■□□□□ 0.44
TRPM2-201ENST00000300481 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
TRPM2-201ENST00000300481 TRIM52Q96A61 297 aa17.77■□□□□ 0.44
TRPM2-201ENST00000300481 NPM2Q86SE8 214 aaKnown RBP17.77■□□□□ 0.43
TRPM2-201ENST00000300481 ZBTB47Q9UFB7 747 aaPredicted RBP17.73■□□□□ 0.43
TRPM2-201ENST00000300481 NACADO15069 1562 aa17.72■□□□□ 0.43
TRPM2-201ENST00000300481 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
TRPM2-201ENST00000300481 ANP32BQ92688 251 aaKnown RBP17.68■□□□□ 0.42
TRPM2-201ENST00000300481 CANXP27824 592 aaKnown RBP17.68■□□□□ 0.42
TRPM2-201ENST00000300481 NBR1Q14596 966 aa17.62■□□□□ 0.41
TRPM2-201ENST00000300481 DCAF1Q9Y4B6 1507 aa17.61■□□□□ 0.41
TRPM2-201ENST00000300481 ZNF326Q5BKZ1 582 aaKnown RBP17.58■□□□□ 0.41
TRPM2-201ENST00000300481 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
TRPM2-201ENST00000300481 P3H3Q8IVL6 736 aa17.56■□□□□ 0.4
TRPM2-201ENST00000300481 ANP32EQ9BTT0 268 aa17.54■□□□□ 0.4
TRPM2-201ENST00000300481 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
TRPM2-201ENST00000300481 HNRNPUQ00839 825 aaKnown RBP eCLIP17.51■□□□□ 0.39
TRPM2-201ENST00000300481 UPF2Q9HAU5 1272 aaKnown RBP17.48■□□□□ 0.39
TRPM2-201ENST00000300481 ARID3CA6NKF2 412 aa17.47■□□□□ 0.39
TRPM2-201ENST00000300481 BCL11AQ9H165 835 aa17.46■□□□□ 0.39
TRPM2-201ENST00000300481 HSP90AA1P07900 732 aaKnown RBP17.45■□□□□ 0.38
TRPM2-201ENST00000300481 CCDC136Q96JN2 1154 aa17.44■□□□□ 0.38
TRPM2-201ENST00000300481 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
TRPM2-201ENST00000300481 ESF1Q9H501 851 aaKnown RBP17.41■□□□□ 0.38
TRPM2-201ENST00000300481 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
TRPM2-201ENST00000300481 DDX10Q13206 875 aaKnown RBP17.39■□□□□ 0.37
TRPM2-201ENST00000300481 PLPPR3Q6T4P5 718 aa17.39■□□□□ 0.37
TRPM2-201ENST00000300481 MIER1Q8N108 512 aa17.38■□□□□ 0.37
TRPM2-201ENST00000300481 CHMP7Q8WUX9 453 aaPredicted RBP17.38■□□□□ 0.37
TRPM2-201ENST00000300481 NEFMP07197 916 aa17.37■□□□□ 0.37
TRPM2-201ENST00000300481 FAM9BQ8IZU0 186 aa17.36■□□□□ 0.37
TRPM2-201ENST00000300481 TONSLQ96HA7 1378 aa17.34■□□□□ 0.37
TRPM2-201ENST00000300481 ARXQ96QS3 562 aa17.31■□□□□ 0.36
TRPM2-201ENST00000300481 DDRGK1Q96HY6 314 aa17.29■□□□□ 0.36
TRPM2-201ENST00000300481 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
TRPM2-201ENST00000300481 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.26■□□□□ 0.35
TRPM2-201ENST00000300481 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
TRPM2-201ENST00000300481 IRX6P78412 446 aaPredicted RBP17.24■□□□□ 0.35
TRPM2-201ENST00000300481 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
TRPM2-201ENST00000300481 EEA1Q15075 1411 aa17.21■□□□□ 0.35
TRPM2-201ENST00000300481 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
TRPM2-201ENST00000300481 TRIM44Q96DX7 344 aaPredicted RBP17.2■□□□□ 0.34
TRPM2-201ENST00000300481 TMC1Q8TDI8 760 aa17.18■□□□□ 0.34
TRPM2-201ENST00000300481 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
TRPM2-201ENST00000300481 MRS2Q9HD23 443 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms