RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 NISCHQ9Y2I1 1504 aa30.45■■■□□ 2.47
EPB42-210ENST00000622454 CCDC180Q9P1Z9 1646 aa26.37■■□□□ 1.81
EPB42-210ENST00000622454 ZCCHC6Q5VYS8 1495 aaKnown RBP25.67■■□□□ 1.7
EPB42-210ENST00000622454 SHROOM4Q9ULL8 1493 aa25.27■■□□□ 1.64
EPB42-210ENST00000622454 DCAF8L2P0C7V8 631 aa25.22■■□□□ 1.63
EPB42-210ENST00000622454 DCAF1Q9Y4B6 1507 aa25.14■■□□□ 1.61
EPB42-210ENST00000622454 ABCC9O60706 1549 aa24.92■■□□□ 1.58
EPB42-210ENST00000622454 MYO15BQ96JP2 1530 aa24.67■■□□□ 1.54
EPB42-210ENST00000622454 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
EPB42-210ENST00000622454 NACADO15069 1562 aa24.53■■□□□ 1.52
EPB42-210ENST00000622454 SCRIBQ14160 1630 aa24.39■■□□□ 1.5
EPB42-210ENST00000622454 RB1CC1Q8TDY2 1594 aa24.31■■□□□ 1.48
EPB42-210ENST00000622454 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
EPB42-210ENST00000622454 RSF1Q96T23 1441 aaPredicted RBP23.83■■□□□ 1.4
EPB42-210ENST00000622454 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
EPB42-210ENST00000622454 CECR2Q9BXF3 1484 aa23.65■■□□□ 1.38
EPB42-210ENST00000622454 BICRAQ9NZM4 1560 aa23.59■■□□□ 1.37
EPB42-210ENST00000622454 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
EPB42-210ENST00000622454 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
EPB42-210ENST00000622454 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
EPB42-210ENST00000622454 WIZO95785 1651 aa23.43■■□□□ 1.34
EPB42-210ENST00000622454 SMARCA4P51532 1647 aa23.33■■□□□ 1.33
EPB42-210ENST00000622454 TOP2AP11388 1531 aaKnown RBP23.15■■□□□ 1.3
EPB42-210ENST00000622454 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
EPB42-210ENST00000622454 PEG3Q9GZU2 1588 aa22.99■■□□□ 1.27
EPB42-210ENST00000622454 SMARCA2P51531 1590 aa22.96■■□□□ 1.27
EPB42-210ENST00000622454 EIF4G1Q04637 1599 aaKnown RBP22.96■■□□□ 1.27
EPB42-210ENST00000622454 CCDC88BA6NC98 1476 aa22.94■■□□□ 1.26
EPB42-210ENST00000622454 ATAD2BQ9ULI0 1458 aa22.9■■□□□ 1.26
EPB42-210ENST00000622454 LOC105371045A0A1W2PR82 267 aa22.89■■□□□ 1.25
EPB42-210ENST00000622454 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
EPB42-210ENST00000622454 FAM9AQ8IZU1 332 aaPredicted RBP22.66■■□□□ 1.22
EPB42-210ENST00000622454 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
EPB42-210ENST00000622454 NCAPD3P42695 1498 aa22.65■■□□□ 1.22
EPB42-210ENST00000622454 HMGXB3Q12766 1538 aa22.63■■□□□ 1.21
EPB42-210ENST00000622454 CC2D2AQ9P2K1 1620 aa22.52■■□□□ 1.2
EPB42-210ENST00000622454 WRNQ14191 1432 aaPredicted RBP eCLIP22.42■■□□□ 1.18
EPB42-210ENST00000622454 PCGF6Q9BYE7 350 aa22.38■■□□□ 1.17
EPB42-210ENST00000622454 EHMT2Q96KQ7 1210 aa22.36■■□□□ 1.17
EPB42-210ENST00000622454 EEA1Q15075 1411 aa22.33■■□□□ 1.17
EPB42-210ENST00000622454 SYNJ1O43426 1573 aa22.32■■□□□ 1.16
EPB42-210ENST00000622454 SOGA1O94964 1423 aa22.31■■□□□ 1.16
EPB42-210ENST00000622454 TRIM26Q12899 539 aaPredicted RBP22.22■■□□□ 1.15
EPB42-210ENST00000622454 CFTRP13569 1480 aa22.22■■□□□ 1.15
EPB42-210ENST00000622454 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
EPB42-210ENST00000622454 CSRNP3Q8WYN3 585 aa22.19■■□□□ 1.14
EPB42-210ENST00000622454 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
EPB42-210ENST00000622454 BIVM-ERCC5R4GMW8 1640 aa22.14■■□□□ 1.14
EPB42-210ENST00000622454 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
EPB42-210ENST00000622454 PRDM2Q13029 1718 aa22.11■■□□□ 1.13
EPB42-210ENST00000622454 HRCP23327 699 aa22.1■■□□□ 1.13
EPB42-210ENST00000622454 TNIKQ9UKE5 1360 aa22.09■■□□□ 1.13
EPB42-210ENST00000622454 GOLGA3Q08378 1498 aa22.07■■□□□ 1.12
EPB42-210ENST00000622454 KIF21BO75037 1637 aa22.04■■□□□ 1.12
EPB42-210ENST00000622454 CEP162Q5TB80 1403 aa22.03■■□□□ 1.12
EPB42-210ENST00000622454 CEP164Q9UPV0 1460 aa22.02■■□□□ 1.12
EPB42-210ENST00000622454 CUX1P39880 1505 aa22■■□□□ 1.11
EPB42-210ENST00000622454 UBTFP17480 764 aaKnown RBP21.99■■□□□ 1.11
EPB42-210ENST00000622454 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
EPB42-210ENST00000622454 NESP48681 1621 aa21.93■■□□□ 1.1
EPB42-210ENST00000622454 FANCD2Q9BXW9 1451 aa21.89■■□□□ 1.1
EPB42-210ENST00000622454 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
EPB42-210ENST00000622454 RAPGEF2Q9Y4G8 1499 aa21.84■■□□□ 1.09
EPB42-210ENST00000622454 KIF27Q86VH2 1401 aa21.8■■□□□ 1.08
EPB42-210ENST00000622454 PPARGC1BQ86YN6 1023 aaKnown RBP21.79■■□□□ 1.08
EPB42-210ENST00000622454 ERICH3Q5RHP9 1530 aa21.79■■□□□ 1.08
EPB42-210ENST00000622454 PRXQ9BXM0 1461 aa21.77■■□□□ 1.07
EPB42-210ENST00000622454 CLIP1P30622 1438 aa21.74■■□□□ 1.07
EPB42-210ENST00000622454 FGD5Q6ZNL6 1462 aa21.72■■□□□ 1.07
EPB42-210ENST00000622454 PDS5BQ9NTI5 1447 aa21.71■■□□□ 1.07
EPB42-210ENST00000622454 DNMBPQ6XZF7 1577 aa21.7■■□□□ 1.06
EPB42-210ENST00000622454 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
EPB42-210ENST00000622454 KIF21AQ7Z4S6 1674 aa21.65■■□□□ 1.06
EPB42-210ENST00000622454 CUX2O14529 1486 aa21.64■■□□□ 1.05
EPB42-210ENST00000622454 VPS8Q8N3P4 1428 aa21.62■■□□□ 1.05
EPB42-210ENST00000622454 URB2Q14146 1524 aaKnown RBP21.61■■□□□ 1.05
EPB42-210ENST00000622454 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.05
EPB42-210ENST00000622454 ZEB1P37275 1124 aaPredicted RBP21.57■■□□□ 1.04
EPB42-210ENST00000622454 IGF1RP08069 1367 aa21.55■■□□□ 1.04
EPB42-210ENST00000622454 RAD54L2Q9Y4B4 1467 aa21.55■■□□□ 1.04
EPB42-210ENST00000622454 TTBK1Q5TCY1 1321 aaPredicted RBP21.53■■□□□ 1.04
EPB42-210ENST00000622454 RANGAP1P46060 587 aaPredicted RBP21.52■■□□□ 1.04
EPB42-210ENST00000622454 ABCA10Q8WWZ4 1543 aa21.49■■□□□ 1.03
EPB42-210ENST00000622454 CARMIL1Q5VZK9 1371 aa21.46■■□□□ 1.03
EPB42-210ENST00000622454 ARAP1Q96P48 1450 aa21.45■■□□□ 1.02
EPB42-210ENST00000622454 APLP2Q06481 763 aa21.45■■□□□ 1.02
EPB42-210ENST00000622454 MRC2Q9UBG0 1479 aa21.42■■□□□ 1.02
EPB42-210ENST00000622454 WDR97A6NE52 1622 aa21.4■■□□□ 1.02
EPB42-210ENST00000622454 ARHGAP35Q9NRY4 1499 aa21.36■■□□□ 1.01
EPB42-210ENST00000622454 CUL7Q14999 1698 aa21.35■■□□□ 1.01
EPB42-210ENST00000622454 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
EPB42-210ENST00000622454 TDRD9Q8NDG6 1382 aaKnown RBP21.33■■□□□ 1.01
EPB42-210ENST00000622454 TARBP1Q13395 1621 aaKnown RBP21.32■■□□□ 1
EPB42-210ENST00000622454 ABCA5Q8WWZ7 1642 aa21.31■■□□□ 1
EPB42-210ENST00000622454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.3■■□□□ 1
EPB42-210ENST00000622454 WDR62O43379 1518 aa21.29■■□□□ 1
EPB42-210ENST00000622454 GAPVD1Q14C86 1478 aa21.28■■□□□ 1
EPB42-210ENST00000622454 CCER1Q8TC90 406 aaPredicted RBP21.28■■□□□ 1
EPB42-210ENST00000622454 CTTNBP2Q8WZ74 1663 aa21.22■□□□□ 0.99
EPB42-210ENST00000622454 THOC2Q8NI27 1593 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms