RNA–Protein interactions for RNA: ENST00000618196.4

MKL1-211, Transcript of MKL/myocardin-like protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKL1, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-211ENST00000618196 NISCHQ9Y2I1 1504 aa26.23■■□□□ 1.79
MKL1-211ENST00000618196 DCAF8L2P0C7V8 631 aa24.68■■□□□ 1.54
MKL1-211ENST00000618196 SHROOM4Q9ULL8 1493 aa23.26■■□□□ 1.31
MKL1-211ENST00000618196 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
MKL1-211ENST00000618196 ABCC9O60706 1549 aa22.8■■□□□ 1.24
MKL1-211ENST00000618196 CCDC180Q9P1Z9 1646 aa22.16■■□□□ 1.14
MKL1-211ENST00000618196 PABPN1Q86U42 306 aaKnown RBP eCLIP22.09■■□□□ 1.13
MKL1-211ENST00000618196 ZCCHC6Q5VYS8 1495 aaKnown RBP21.75■■□□□ 1.07
MKL1-211ENST00000618196 EHMT2Q96KQ7 1210 aa21.59■■□□□ 1.05
MKL1-211ENST00000618196 PCGF6Q9BYE7 350 aa21.57■■□□□ 1.04
MKL1-211ENST00000618196 HRCP23327 699 aa21.52■■□□□ 1.04
MKL1-211ENST00000618196 SCRIBQ14160 1630 aa21.5■■□□□ 1.03
MKL1-211ENST00000618196 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.02
MKL1-211ENST00000618196 FAM9AQ8IZU1 332 aaPredicted RBP21.35■■□□□ 1.01
MKL1-211ENST00000618196 NACADO15069 1562 aa21.28■■□□□ 1
MKL1-211ENST00000618196 TRIM41Q8WV44 630 aa21.19■□□□□ 0.98
MKL1-211ENST00000618196 PPARGC1BQ86YN6 1023 aaKnown RBP21.16■□□□□ 0.98
MKL1-211ENST00000618196 PELP1Q8IZL8 1130 aaKnown RBP21.12■□□□□ 0.97
MKL1-211ENST00000618196 DCAF1Q9Y4B6 1507 aa21.01■□□□□ 0.95
MKL1-211ENST00000618196 RANGAP1P46060 587 aaPredicted RBP20.95■□□□□ 0.94
MKL1-211ENST00000618196 CHIC1Q5VXU3 224 aa20.92■□□□□ 0.94
MKL1-211ENST00000618196 ZEB1P37275 1124 aaPredicted RBP20.74■□□□□ 0.91
MKL1-211ENST00000618196 UBTFP17480 764 aaKnown RBP20.72■□□□□ 0.91
MKL1-211ENST00000618196 MYO15BQ96JP2 1530 aa20.7■□□□□ 0.9
MKL1-211ENST00000618196 TRIM26Q12899 539 aaPredicted RBP20.69■□□□□ 0.9
MKL1-211ENST00000618196 CECR2Q9BXF3 1484 aa20.68■□□□□ 0.9
MKL1-211ENST00000618196 LOC105371045A0A1W2PR82 267 aa20.66■□□□□ 0.9
MKL1-211ENST00000618196 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
MKL1-211ENST00000618196 TTBK1Q5TCY1 1321 aaPredicted RBP20.6■□□□□ 0.89
MKL1-211ENST00000618196 APLP2Q06481 763 aa20.57■□□□□ 0.88
MKL1-211ENST00000618196 ATP1B4Q9UN42 357 aaPredicted RBP20.55■□□□□ 0.88
MKL1-211ENST00000618196 BAZ1AQ9NRL2 1556 aaPredicted RBP20.43■□□□□ 0.86
MKL1-211ENST00000618196 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
MKL1-211ENST00000618196 MYT1Q01538 1121 aa20.42■□□□□ 0.86
MKL1-211ENST00000618196 CENPBP07199 599 aaPredicted RBP20.38■□□□□ 0.85
MKL1-211ENST00000618196 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
MKL1-211ENST00000618196 FBLN2P98095 1184 aa20.33■□□□□ 0.85
MKL1-211ENST00000618196 CCER1Q8TC90 406 aaPredicted RBP20.26■□□□□ 0.83
MKL1-211ENST00000618196 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
MKL1-211ENST00000618196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
MKL1-211ENST00000618196 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
MKL1-211ENST00000618196 SMARCA2P51531 1590 aa20.08■□□□□ 0.81
MKL1-211ENST00000618196 WIZO95785 1651 aa20.07■□□□□ 0.8
MKL1-211ENST00000618196 ATAD2BQ9ULI0 1458 aa20.07■□□□□ 0.8
MKL1-211ENST00000618196 CSRNP3Q8WYN3 585 aa20.04■□□□□ 0.8
MKL1-211ENST00000618196 GTF3C3Q9Y5Q9 886 aa20.02■□□□□ 0.8
MKL1-211ENST00000618196 YTHDC1Q96MU7 727 aaKnown RBP20.02■□□□□ 0.8
MKL1-211ENST00000618196 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
MKL1-211ENST00000618196 ERCC6Q03468 1493 aa20.01■□□□□ 0.79
MKL1-211ENST00000618196 ACIN1Q9UKV3 1341 aaKnown RBP20■□□□□ 0.79
MKL1-211ENST00000618196 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
MKL1-211ENST00000618196 EIF4G1Q04637 1599 aaKnown RBP19.96■□□□□ 0.79
MKL1-211ENST00000618196 DIEXFQ68CQ4 756 aaKnown RBP19.94■□□□□ 0.78
MKL1-211ENST00000618196 BICRAQ9NZM4 1560 aa19.93■□□□□ 0.78
MKL1-211ENST00000618196 P3H3Q8IVL6 736 aa19.93■□□□□ 0.78
MKL1-211ENST00000618196 DNAJC5BQ9UF47 199 aa19.92■□□□□ 0.78
MKL1-211ENST00000618196 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
MKL1-211ENST00000618196 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
MKL1-211ENST00000618196 TOP2AP11388 1531 aaKnown RBP19.84■□□□□ 0.77
MKL1-211ENST00000618196 ARID3CA6NKF2 412 aa19.81■□□□□ 0.76
MKL1-211ENST00000618196 CADPSQ9ULU8 1353 aa19.81■□□□□ 0.76
MKL1-211ENST00000618196 CHMP7Q8WUX9 453 aaPredicted RBP19.79■□□□□ 0.76
MKL1-211ENST00000618196 ITGAEP38570 1179 aa19.78■□□□□ 0.76
MKL1-211ENST00000618196 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
MKL1-211ENST00000618196 NCAPD3P42695 1498 aa19.75■□□□□ 0.75
MKL1-211ENST00000618196 CC2D2AQ9P2K1 1620 aa19.74■□□□□ 0.75
MKL1-211ENST00000618196 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
MKL1-211ENST00000618196 MYT1LQ9UL68 1186 aa19.72■□□□□ 0.75
MKL1-211ENST00000618196 ABCC8Q09428 1581 aa19.66■□□□□ 0.74
MKL1-211ENST00000618196 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
MKL1-211ENST00000618196 KIF27Q86VH2 1401 aa19.57■□□□□ 0.72
MKL1-211ENST00000618196 FANCD2Q9BXW9 1451 aa19.55■□□□□ 0.72
MKL1-211ENST00000618196 CUX2O14529 1486 aa19.54■□□□□ 0.72
MKL1-211ENST00000618196 CEP164Q9UPV0 1460 aa19.52■□□□□ 0.72
MKL1-211ENST00000618196 NESP48681 1621 aa19.52■□□□□ 0.71
MKL1-211ENST00000618196 SOGA1O94964 1423 aa19.51■□□□□ 0.71
MKL1-211ENST00000618196 ZNF316A6NFI3 1004 aaPredicted RBP19.48■□□□□ 0.71
MKL1-211ENST00000618196 FAM50AQ14320 339 aaKnown RBP19.48■□□□□ 0.71
MKL1-211ENST00000618196 EEA1Q15075 1411 aa19.4■□□□□ 0.7
MKL1-211ENST00000618196 HMGXB3Q12766 1538 aa19.4■□□□□ 0.7
MKL1-211ENST00000618196 NPM1P06748 294 aaKnown RBP eCLIP19.39■□□□□ 0.69
MKL1-211ENST00000618196 CARMIL1Q5VZK9 1371 aa19.38■□□□□ 0.69
MKL1-211ENST00000618196 ZNF777Q9ULD5 760 aaPredicted RBP19.33■□□□□ 0.68
MKL1-211ENST00000618196 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
MKL1-211ENST00000618196 CFTRP13569 1480 aa19.32■□□□□ 0.68
MKL1-211ENST00000618196 GOLGA3Q08378 1498 aa19.3■□□□□ 0.68
MKL1-211ENST00000618196 CLIP1P30622 1438 aa19.3■□□□□ 0.68
MKL1-211ENST00000618196 RAD54L2Q9Y4B4 1467 aa19.25■□□□□ 0.67
MKL1-211ENST00000618196 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
MKL1-211ENST00000618196 MIER1Q8N108 512 aa19.21■□□□□ 0.67
MKL1-211ENST00000618196 KCNH8Q96L42 1107 aa19.21■□□□□ 0.67
MKL1-211ENST00000618196 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
MKL1-211ENST00000618196 CEP162Q5TB80 1403 aa19.19■□□□□ 0.66
MKL1-211ENST00000618196 NEFLP07196 543 aa19.15■□□□□ 0.66
MKL1-211ENST00000618196 ERICH6Q7L0X2 663 aa19.14■□□□□ 0.65
MKL1-211ENST00000618196 PEG3Q9GZU2 1588 aa19.14■□□□□ 0.65
MKL1-211ENST00000618196 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.65
MKL1-211ENST00000618196 TRIM52Q96A61 297 aa19.14■□□□□ 0.65
MKL1-211ENST00000618196 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.654e-6■□□□□ 10.8
MKL1-211ENST00000618196 MTUS2Q5JR59 1369 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms