Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.93■□□□□ 0.3
TNNI2P48788 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.93■□□□□ 0.3
TNNI2P48788 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNNI2P48788 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TNNI2P48788 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNNI2P48788 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNNI2P48788 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TNNI2P48788 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNNI2P48788 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNNI2P48788 AC023824.1-201ENST00000562945 2975 ntBASIC16.92■□□□□ 0.3
TNNI2P48788 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.92■□□□□ 0.3
TNNI2P48788 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TNNI2P48788 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
TNNI2P48788 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.92■□□□□ 0.3
TNNI2P48788 AC103702.1-201ENST00000548801 2630 ntBASIC16.92■□□□□ 0.3
TNNI2P48788 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TNNI2P48788 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.92■□□□□ 0.3
TNNI2P48788 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.92■□□□□ 0.3
TNNI2P48788 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.92■□□□□ 0.3
TNNI2P48788 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.92■□□□□ 0.3
TNNI2P48788 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.92■□□□□ 0.3
TNNI2P48788 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.92■□□□□ 0.3
TNNI2P48788 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.92■□□□□ 0.3
TNNI2P48788 AC095040.1-201ENST00000513286 675 ntBASIC16.92■□□□□ 0.3
TNNI2P48788 AC005740.1-201ENST00000515639 522 ntBASIC16.92■□□□□ 0.3
TNNI2P48788 KRT8P2-201ENST00000556193 944 ntBASIC16.92■□□□□ 0.3
TNNI2P48788 AC104506.1-201ENST00000609247 429 ntBASIC16.92■□□□□ 0.3
TNNI2P48788 MIR6074-201ENST00000612054 107 ntBASIC16.92■□□□□ 0.3
TNNI2P48788 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 AC002472.4-201ENST00000641915 272 ntBASIC16.92■□□□□ 0.3
TNNI2P48788 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TNNI2P48788 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.92■□□□□ 0.3
TNNI2P48788 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNNI2P48788 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.92■□□□□ 0.3
TNNI2P48788 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TNNI2P48788 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TNNI2P48788 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
TNNI2P48788 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TNNI2P48788 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
TNNI2P48788 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TNNI2P48788 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
TNNI2P48788 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.91■□□□□ 0.3
TNNI2P48788 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.91■□□□□ 0.3
TNNI2P48788 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.91■□□□□ 0.3
TNNI2P48788 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC16.91■□□□□ 0.3
TNNI2P48788 AC093909.3-201ENST00000504783 336 ntBASIC16.91■□□□□ 0.3
TNNI2P48788 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.91■□□□□ 0.3
TNNI2P48788 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.91■□□□□ 0.3
TNNI2P48788 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.91■□□□□ 0.3
TNNI2P48788 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.91■□□□□ 0.3
TNNI2P48788 AC244250.3-201ENST00000620749 366 ntBASIC16.91■□□□□ 0.3
TNNI2P48788 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.91■□□□□ 0.3
TNNI2P48788 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.91■□□□□ 0.3
TNNI2P48788 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TNNI2P48788 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
TNNI2P48788 AC025183.3-201ENST00000623526 1482 ntBASIC16.91■□□□□ 0.3
TNNI2P48788 AL354702.1-201ENST00000442006 1960 ntBASIC16.91■□□□□ 0.3
TNNI2P48788 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TNNI2P48788 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TNNI2P48788 AC215219.1-201ENST00000400706 1817 ntBASIC16.91■□□□□ 0.3
TNNI2P48788 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.91■□□□□ 0.3
TNNI2P48788 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.91■□□□□ 0.3
TNNI2P48788 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TNNI2P48788 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TNNI2P48788 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNNI2P48788 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms