Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.83□□□□□ -0.36
APOA1P02647 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.83□□□□□ -0.36
APOA1P02647 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.83□□□□□ -0.36
APOA1P02647 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
APOA1P02647 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.83□□□□□ -0.36
APOA1P02647 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.83□□□□□ -0.36
APOA1P02647 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.83□□□□□ -0.36
APOA1P02647 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
APOA1P02647 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 AL033527.5-202ENST00000641632 1098 ntBASIC12.83□□□□□ -0.36
APOA1P02647 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC12.83□□□□□ -0.36
APOA1P02647 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.83□□□□□ -0.36
APOA1P02647 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
APOA1P02647 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
APOA1P02647 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.83□□□□□ -0.36
APOA1P02647 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
APOA1P02647 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
APOA1P02647 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 MARK2P9-201ENST00000430958 1727 ntBASIC12.82□□□□□ -0.36
APOA1P02647 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.82□□□□□ -0.36
APOA1P02647 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.82□□□□□ -0.36
APOA1P02647 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.82□□□□□ -0.36
APOA1P02647 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.82□□□□□ -0.36
APOA1P02647 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 FAAHP1-202ENST00000446499 1238 ntBASIC12.82□□□□□ -0.36
APOA1P02647 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 RNA5SP416-201ENST00000516838 111 ntBASIC12.82□□□□□ -0.36
APOA1P02647 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
APOA1P02647 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.82□□□□□ -0.36
APOA1P02647 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
APOA1P02647 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.82□□□□□ -0.36
APOA1P02647 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 AL021155.1-201ENST00000438808 2637 ntBASIC12.82□□□□□ -0.36
APOA1P02647 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
APOA1P02647 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC12.82□□□□□ -0.36
APOA1P02647 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
APOA1P02647 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
APOA1P02647 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms