RNA–Protein interactions for RNA: ENST00000415485.7

RPH3A-202, Transcript of rabphilin 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPH3A, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-202ENST00000415485 NISCHQ9Y2I1 1504 aa21.31■■□□□ 1
RPH3A-202ENST00000415485 DCAF8L2P0C7V8 631 aa21.04■□□□□ 0.96
RPH3A-202ENST00000415485 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
RPH3A-202ENST00000415485 SHROOM4Q9ULL8 1493 aa20■□□□□ 0.79
RPH3A-202ENST00000415485 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
RPH3A-202ENST00000415485 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
RPH3A-202ENST00000415485 PELP1Q8IZL8 1130 aaKnown RBP19.31■□□□□ 0.68
RPH3A-202ENST00000415485 FAM9AQ8IZU1 332 aaPredicted RBP19.2■□□□□ 0.66
RPH3A-202ENST00000415485 APLP2Q06481 763 aa19.13■□□□□ 0.65
RPH3A-202ENST00000415485 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.65
RPH3A-202ENST00000415485 CENPBP07199 599 aaPredicted RBP18.96■□□□□ 0.63
RPH3A-202ENST00000415485 TTBK1Q5TCY1 1321 aaPredicted RBP18.94■□□□□ 0.62
RPH3A-202ENST00000415485 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
RPH3A-202ENST00000415485 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
RPH3A-202ENST00000415485 HRCP23327 699 aa18.73■□□□□ 0.59
RPH3A-202ENST00000415485 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.57
RPH3A-202ENST00000415485 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
RPH3A-202ENST00000415485 UBTFP17480 764 aaKnown RBP18.56■□□□□ 0.56
RPH3A-202ENST00000415485 CHIC1Q5VXU3 224 aa18.51■□□□□ 0.55
RPH3A-202ENST00000415485 MYT1Q01538 1121 aa18.51■□□□□ 0.55
RPH3A-202ENST00000415485 ABCC9O60706 1549 aa18.5■□□□□ 0.55
RPH3A-202ENST00000415485 YTHDC1Q96MU7 727 aaKnown RBP18.46■□□□□ 0.55
RPH3A-202ENST00000415485 PPARGC1BQ86YN6 1023 aaKnown RBP18.46■□□□□ 0.55
RPH3A-202ENST00000415485 ERICH6Q7L0X2 663 aa18.45■□□□□ 0.54
RPH3A-202ENST00000415485 LOC105371045A0A1W2PR82 267 aa18.43■□□□□ 0.54
RPH3A-202ENST00000415485 NEFLP07196 543 aa18.33■□□□□ 0.53
RPH3A-202ENST00000415485 ATP1B4Q9UN42 357 aaPredicted RBP18.31■□□□□ 0.52
RPH3A-202ENST00000415485 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
RPH3A-202ENST00000415485 HNRNPUL2Q1KMD3 747 aaKnown RBP18.03■□□□□ 0.48
RPH3A-202ENST00000415485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.01■□□□□ 0.47
RPH3A-202ENST00000415485 DIEXFQ68CQ4 756 aaKnown RBP18■□□□□ 0.47
RPH3A-202ENST00000415485 ITGAEP38570 1179 aa17.96■□□□□ 0.46
RPH3A-202ENST00000415485 GTF3C3Q9Y5Q9 886 aa17.74■□□□□ 0.43
RPH3A-202ENST00000415485 CCDC180Q9P1Z9 1646 aa17.68■□□□□ 0.42
RPH3A-202ENST00000415485 POLR3GLQ9BT43 218 aa17.67■□□□□ 0.42
RPH3A-202ENST00000415485 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
RPH3A-202ENST00000415485 DAXXQ9UER7 740 aaPredicted RBP17.63■□□□□ 0.41
RPH3A-202ENST00000415485 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.41
RPH3A-202ENST00000415485 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.4
RPH3A-202ENST00000415485 CNGB1Q14028 1251 aaPredicted RBP17.55■□□□□ 0.4
RPH3A-202ENST00000415485 SCRIBQ14160 1630 aa17.52■□□□□ 0.4
RPH3A-202ENST00000415485 FAM50AQ14320 339 aaKnown RBP17.49■□□□□ 0.39
RPH3A-202ENST00000415485 BCANQ96GW7 911 aa17.45■□□□□ 0.38
RPH3A-202ENST00000415485 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
RPH3A-202ENST00000415485 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
RPH3A-202ENST00000415485 DCAF1Q9Y4B6 1507 aa17.4■□□□□ 0.38
RPH3A-202ENST00000415485 ANP32CO43423 234 aa17.39■□□□□ 0.37
RPH3A-202ENST00000415485 CSRNP3Q8WYN3 585 aa17.37■□□□□ 0.37
RPH3A-202ENST00000415485 TRIM52Q96A61 297 aa17.33■□□□□ 0.37
RPH3A-202ENST00000415485 MYT1LQ9UL68 1186 aa17.32■□□□□ 0.36
RPH3A-202ENST00000415485 CDK11AQ9UQ88 783 aaPredicted RBP17.31■□□□□ 0.36
RPH3A-202ENST00000415485 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
RPH3A-202ENST00000415485 CLSPNQ9HAW4 1339 aa17.25■□□□□ 0.35
RPH3A-202ENST00000415485 FBLN2P98095 1184 aa17.19■□□□□ 0.34
RPH3A-202ENST00000415485 NACADO15069 1562 aa17.17■□□□□ 0.34
RPH3A-202ENST00000415485 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
RPH3A-202ENST00000415485 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
RPH3A-202ENST00000415485 ZNF326Q5BKZ1 582 aaKnown RBP17.12■□□□□ 0.33
RPH3A-202ENST00000415485 FKBP8Q14318 412 aa17.07■□□□□ 0.32
RPH3A-202ENST00000415485 P3H3Q8IVL6 736 aa17.05■□□□□ 0.32
RPH3A-202ENST00000415485 MYO15BQ96JP2 1530 aa17.02■□□□□ 0.32
RPH3A-202ENST00000415485 DDX10Q13206 875 aaKnown RBP16.99■□□□□ 0.31
RPH3A-202ENST00000415485 ANP32AP39687 249 aaKnown RBP16.98■□□□□ 0.31
RPH3A-202ENST00000415485 MIER1Q8N108 512 aa16.98■□□□□ 0.31
RPH3A-202ENST00000415485 HNRNPUQ00839 825 aaKnown RBP eCLIP16.94■□□□□ 0.3
RPH3A-202ENST00000415485 TONSLQ96HA7 1378 aa16.93■□□□□ 0.3
RPH3A-202ENST00000415485 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
RPH3A-202ENST00000415485 ARID3CA6NKF2 412 aa16.84■□□□□ 0.29
RPH3A-202ENST00000415485 NPM2Q86SE8 214 aaKnown RBP16.83■□□□□ 0.29
RPH3A-202ENST00000415485 CANXP27824 592 aaKnown RBP16.82■□□□□ 0.28
RPH3A-202ENST00000415485 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
RPH3A-202ENST00000415485 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
RPH3A-202ENST00000415485 BAZ1BQ9UIG0 1483 aaKnown RBP16.78■□□□□ 0.28
RPH3A-202ENST00000415485 ZBTB47Q9UFB7 747 aaPredicted RBP16.78■□□□□ 0.28
RPH3A-202ENST00000415485 ZNF777Q9ULD5 760 aaPredicted RBP16.76■□□□□ 0.27
RPH3A-202ENST00000415485 CLIP1P30622 1438 aa16.76■□□□□ 0.27
RPH3A-202ENST00000415485 CCDC136Q96JN2 1154 aa16.72■□□□□ 0.27
RPH3A-202ENST00000415485 CEP162Q5TB80 1403 aa16.71■□□□□ 0.27
RPH3A-202ENST00000415485 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
RPH3A-202ENST00000415485 MRS2Q9HD23 443 aa16.69■□□□□ 0.26
RPH3A-202ENST00000415485 EEA1Q15075 1411 aa16.68■□□□□ 0.26
RPH3A-202ENST00000415485 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
RPH3A-202ENST00000415485 HIRIP3Q9BW71 556 aaPredicted RBP16.68■□□□□ 0.26
RPH3A-202ENST00000415485 CHIC2Q9UKJ5 165 aa16.66■□□□□ 0.26
RPH3A-202ENST00000415485 NEFMP07197 916 aa16.65■□□□□ 0.26
RPH3A-202ENST00000415485 SALL2Q9Y467 1007 aaPredicted RBP16.64■□□□□ 0.25
RPH3A-202ENST00000415485 IRX6P78412 446 aaPredicted RBP16.64■□□□□ 0.25
RPH3A-202ENST00000415485 NBR1Q14596 966 aa16.62■□□□□ 0.25
RPH3A-202ENST00000415485 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
RPH3A-202ENST00000415485 BCL11AQ9H165 835 aa16.62■□□□□ 0.25
RPH3A-202ENST00000415485 GOLGA3Q08378 1498 aa16.61■□□□□ 0.25
RPH3A-202ENST00000415485 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
RPH3A-202ENST00000415485 TNIKQ9UKE5 1360 aa16.6■□□□□ 0.25
RPH3A-202ENST00000415485 EIF4G2P78344 907 aaKnown RBP eCLIP16.59■□□□□ 0.25
RPH3A-202ENST00000415485 MTUS2Q5JR59 1369 aa16.58■□□□□ 0.25
RPH3A-202ENST00000415485 UPF2Q9HAU5 1272 aaKnown RBP16.57■□□□□ 0.24
RPH3A-202ENST00000415485 ANP32EQ9BTT0 268 aa16.55■□□□□ 0.24
RPH3A-202ENST00000415485 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
RPH3A-202ENST00000415485 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.52■□□□□ 0.24
RPH3A-202ENST00000415485 MROH2BQ7Z745 1585 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms