RNA–Protein interactions for RNA: ENST00000302287.7

VSTM2A-201, Transcript of V-set and transmembrane domain containing 2A, humanhuman

TSL 1 (best) BASIC

Gene VSTM2A, Length 3,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-201ENST00000302287 NISCHQ9Y2I1 1504 aa25.05■■□□□ 1.6
VSTM2A-201ENST00000302287 PPARGC1BQ86YN6 1023 aaKnown RBP22.01■■□□□ 1.11
VSTM2A-201ENST00000302287 CCDC180Q9P1Z9 1646 aa21.96■■□□□ 1.11
VSTM2A-201ENST00000302287 HRCP23327 699 aa21.9■■□□□ 1.1
VSTM2A-201ENST00000302287 PELP1Q8IZL8 1130 aaKnown RBP21.75■■□□□ 1.07
VSTM2A-201ENST00000302287 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.05
VSTM2A-201ENST00000302287 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
VSTM2A-201ENST00000302287 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
VSTM2A-201ENST00000302287 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
VSTM2A-201ENST00000302287 MYT1Q01538 1121 aa20.92■□□□□ 0.94
VSTM2A-201ENST00000302287 ABCC9O60706 1549 aa20.77■□□□□ 0.91
VSTM2A-201ENST00000302287 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
VSTM2A-201ENST00000302287 DCAF1Q9Y4B6 1507 aa20.73■□□□□ 0.91
VSTM2A-201ENST00000302287 MYO15BQ96JP2 1530 aa20.6■□□□□ 0.89
VSTM2A-201ENST00000302287 NEUROD1Q13562 356 aa20.55■□□□□ 0.88
VSTM2A-201ENST00000302287 GTF3C3Q9Y5Q9 886 aa20.54■□□□□ 0.88
VSTM2A-201ENST00000302287 DCAF8L2P0C7V8 631 aa20.46■□□□□ 0.87
VSTM2A-201ENST00000302287 ACIN1Q9UKV3 1341 aaKnown RBP20.42■□□□□ 0.86
VSTM2A-201ENST00000302287 NACADO15069 1562 aa20.41■□□□□ 0.86
VSTM2A-201ENST00000302287 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
VSTM2A-201ENST00000302287 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
VSTM2A-201ENST00000302287 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
VSTM2A-201ENST00000302287 TRIM26Q12899 539 aaPredicted RBP20.23■□□□□ 0.83
VSTM2A-201ENST00000302287 BCL11AQ9H165 835 aa20.18■□□□□ 0.82
VSTM2A-201ENST00000302287 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
VSTM2A-201ENST00000302287 FAM9AQ8IZU1 332 aaPredicted RBP20.09■□□□□ 0.81
VSTM2A-201ENST00000302287 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
VSTM2A-201ENST00000302287 ZEB1P37275 1124 aaPredicted RBP20.05■□□□□ 0.8
VSTM2A-201ENST00000302287 UNC13AQ9UPW8 1703 aa20.04■□□□□ 0.8
VSTM2A-201ENST00000302287 CENPBP07199 599 aaPredicted RBP20.03■□□□□ 0.8
VSTM2A-201ENST00000302287 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
VSTM2A-201ENST00000302287 PRKCSHP14314 528 aaPredicted RBP19.85■□□□□ 0.77
VSTM2A-201ENST00000302287 DIEXFQ68CQ4 756 aaKnown RBP19.84■□□□□ 0.77
VSTM2A-201ENST00000302287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
VSTM2A-201ENST00000302287 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
VSTM2A-201ENST00000302287 CSRNP3Q8WYN3 585 aa19.65■□□□□ 0.74
VSTM2A-201ENST00000302287 CCER1Q8TC90 406 aaPredicted RBP19.64■□□□□ 0.74
VSTM2A-201ENST00000302287 TTBK1Q5TCY1 1321 aaPredicted RBP19.63■□□□□ 0.73
VSTM2A-201ENST00000302287 ANP32EQ9BTT0 268 aa19.58■□□□□ 0.73
VSTM2A-201ENST00000302287 PABPN1Q86U42 306 aaKnown RBP eCLIP19.51■□□□□ 0.71
VSTM2A-201ENST00000302287 CECR2Q9BXF3 1484 aa19.48■□□□□ 0.71
VSTM2A-201ENST00000302287 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
VSTM2A-201ENST00000302287 RSF1Q96T23 1441 aaPredicted RBP19.36■□□□□ 0.69
VSTM2A-201ENST00000302287 MIER1Q8N108 512 aa19.36■□□□□ 0.69
VSTM2A-201ENST00000302287 SMARCA4P51532 1647 aa19.32■□□□□ 0.68
VSTM2A-201ENST00000302287 BAZ1AQ9NRL2 1556 aaPredicted RBP19.31■□□□□ 0.68
VSTM2A-201ENST00000302287 TSHZ2Q9NRE2 1034 aa19.31■□□□□ 0.68
VSTM2A-201ENST00000302287 BCANQ96GW7 911 aa19.24■□□□□ 0.67
VSTM2A-201ENST00000302287 WIZO95785 1651 aa19.23■□□□□ 0.67
VSTM2A-201ENST00000302287 SUPT16HQ9Y5B9 1047 aaKnown RBP19.21■□□□□ 0.66
VSTM2A-201ENST00000302287 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
VSTM2A-201ENST00000302287 ZNF316A6NFI3 1004 aaPredicted RBP19.13■□□□□ 0.65
VSTM2A-201ENST00000302287 PEG3Q9GZU2 1588 aa19.12■□□□□ 0.65
VSTM2A-201ENST00000302287 EIF4G1Q04637 1599 aaKnown RBP19.11■□□□□ 0.65
VSTM2A-201ENST00000302287 ANO8Q9HCE9 1232 aaPredicted RBP19.07■□□□□ 0.64
VSTM2A-201ENST00000302287 TOP2AP11388 1531 aaKnown RBP18.99■□□□□ 0.63
VSTM2A-201ENST00000302287 ATAD2BQ9ULI0 1458 aa18.98■□□□□ 0.63
VSTM2A-201ENST00000302287 ERICH6Q7L0X2 663 aa18.96■□□□□ 0.63
VSTM2A-201ENST00000302287 SMARCA2P51531 1590 aa18.94■□□□□ 0.62
VSTM2A-201ENST00000302287 CCDC136Q96JN2 1154 aa18.91■□□□□ 0.62
VSTM2A-201ENST00000302287 CC2D2AQ9P2K1 1620 aa18.87■□□□□ 0.61
VSTM2A-201ENST00000302287 ITGAEP38570 1179 aa18.87■□□□□ 0.61
VSTM2A-201ENST00000302287 NCAPD3P42695 1498 aa18.83■□□□□ 0.61
VSTM2A-201ENST00000302287 HMGXB3Q12766 1538 aa18.83■□□□□ 0.6
VSTM2A-201ENST00000302287 RBM19Q9Y4C8 960 aaKnown RBP18.83■□□□□ 0.6
VSTM2A-201ENST00000302287 BAZ1BQ9UIG0 1483 aaKnown RBP18.81■□□□□ 0.6
VSTM2A-201ENST00000302287 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.6
VSTM2A-201ENST00000302287 MSH5O43196 834 aa18.77■□□□□ 0.59
VSTM2A-201ENST00000302287 FKBP8Q14318 412 aa18.75■□□□□ 0.59
VSTM2A-201ENST00000302287 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
VSTM2A-201ENST00000302287 APLP2Q06481 763 aa18.71■□□□□ 0.59
VSTM2A-201ENST00000302287 KCNH8Q96L42 1107 aa18.68■□□□□ 0.58
VSTM2A-201ENST00000302287 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.67■□□□□ 0.58
VSTM2A-201ENST00000302287 HNRNPUL2Q1KMD3 747 aaKnown RBP18.66■□□□□ 0.58
VSTM2A-201ENST00000302287 RTN4Q9NQC3 1192 aaKnown RBP18.66■□□□□ 0.58
VSTM2A-201ENST00000302287 DEKP35659 375 aaKnown RBP18.64■□□□□ 0.57
VSTM2A-201ENST00000302287 NBR1Q14596 966 aa18.56■□□□□ 0.56
VSTM2A-201ENST00000302287 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
VSTM2A-201ENST00000302287 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
VSTM2A-201ENST00000302287 IRX6P78412 446 aaPredicted RBP18.42■□□□□ 0.54
VSTM2A-201ENST00000302287 PRDM2Q13029 1718 aa18.42■□□□□ 0.54
VSTM2A-201ENST00000302287 NEFLP07196 543 aa18.41■□□□□ 0.54
VSTM2A-201ENST00000302287 IL27Q8NEV9 243 aa18.4■□□□□ 0.54
VSTM2A-201ENST00000302287 CFTRP13569 1480 aa18.39■□□□□ 0.53
VSTM2A-201ENST00000302287 TRIM52Q96A61 297 aa18.37■□□□□ 0.53
VSTM2A-201ENST00000302287 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
VSTM2A-201ENST00000302287 EIF5BO60841 1220 aaKnown RBP18.32■□□□□ 0.52
VSTM2A-201ENST00000302287 CADPSQ9ULU8 1353 aa18.29■□□□□ 0.52
VSTM2A-201ENST00000302287 NESP48681 1621 aa18.26■□□□□ 0.51
VSTM2A-201ENST00000302287 LAMC3Q9Y6N6 1575 aa18.23■□□□□ 0.51
VSTM2A-201ENST00000302287 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
VSTM2A-201ENST00000302287 UBE2Q2Q8WVN8 375 aa18.2■□□□□ 0.5
VSTM2A-201ENST00000302287 CDK11AQ9UQ88 783 aaPredicted RBP18.19■□□□□ 0.5
VSTM2A-201ENST00000302287 PAK3O75914 559 aaPredicted RBP18.17■□□□□ 0.5
VSTM2A-201ENST00000302287 WRNQ14191 1432 aaPredicted RBP eCLIP18.16■□□□□ 0.5
VSTM2A-201ENST00000302287 BIVM-ERCC5R4GMW8 1640 aa18.16■□□□□ 0.5
VSTM2A-201ENST00000302287 RANGAP1P46060 587 aaPredicted RBP18.15■□□□□ 0.5
VSTM2A-201ENST00000302287 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
VSTM2A-201ENST00000302287 FANCIQ9NVI1 1328 aa18.13■□□□□ 0.49
VSTM2A-201ENST00000302287 CUX1P39880 1505 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms