Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 SNX5-217ENST00000606557 1087 ntBASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 C9orf163-202ENST00000624034 2573 ntBASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA11Q9Y5H2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA11Q9Y5H2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGA11Q9Y5H2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA11Q9Y5H2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA11Q9Y5H2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGA11Q9Y5H2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGA11Q9Y5H2 AC021242.3-201ENST00000607598 1377 ntBASIC21.84■■□□□ 1.09
PCDHGA11Q9Y5H2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGA11Q9Y5H2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHGA11Q9Y5H2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA11Q9Y5H2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHGA11Q9Y5H2 ANOS2P-203ENST00000472227 1816 ntBASIC21.83■■□□□ 1.09
PCDHGA11Q9Y5H2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGA11Q9Y5H2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA11Q9Y5H2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGA11Q9Y5H2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGA11Q9Y5H2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGA11Q9Y5H2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHGA11Q9Y5H2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGA11Q9Y5H2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDHGA11Q9Y5H2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
PCDHGA11Q9Y5H2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDHGA11Q9Y5H2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PCDHGA11Q9Y5H2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 AC092068.2-201ENST00000590491 1708 ntBASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 RARRES2P1-201ENST00000474487 481 ntBASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGA11Q9Y5H2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA11Q9Y5H2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
PCDHGA11Q9Y5H2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA11Q9Y5H2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA11Q9Y5H2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA11Q9Y5H2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA11Q9Y5H2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA11Q9Y5H2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGA11Q9Y5H2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 Z92544.1-202ENST00000571933 1220 ntBASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PCDHGA11Q9Y5H2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGA11Q9Y5H2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHGA11Q9Y5H2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGA11Q9Y5H2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms