Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC4Q9Y5F7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC4Q9Y5F7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PCDHGC4Q9Y5F7 AC009102.2-201ENST00000606772 1639 ntBASIC22.83■■□□□ 1.25
PCDHGC4Q9Y5F7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGC4Q9Y5F7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
PCDHGC4Q9Y5F7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGC4Q9Y5F7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
PCDHGC4Q9Y5F7 AC131281.2-201ENST00000520478 145 ntBASIC22.83■■□□□ 1.25
PCDHGC4Q9Y5F7 AL512631.2-201ENST00000604634 923 ntBASIC22.83■■□□□ 1.25
PCDHGC4Q9Y5F7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGC4Q9Y5F7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGC4Q9Y5F7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGC4Q9Y5F7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHGC4Q9Y5F7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHGC4Q9Y5F7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGC4Q9Y5F7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
PCDHGC4Q9Y5F7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGC4Q9Y5F7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGC4Q9Y5F7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
PCDHGC4Q9Y5F7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGC4Q9Y5F7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDHGC4Q9Y5F7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGC4Q9Y5F7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
PCDHGC4Q9Y5F7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC4Q9Y5F7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC4Q9Y5F7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC4Q9Y5F7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC4Q9Y5F7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.81■■□□□ 1.24
PCDHGC4Q9Y5F7 MIR4466-201ENST00000606121 54 ntBASIC22.81■■□□□ 1.24
PCDHGC4Q9Y5F7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC4Q9Y5F7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC4Q9Y5F7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC4Q9Y5F7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC4Q9Y5F7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC4Q9Y5F7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGC4Q9Y5F7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHGC4Q9Y5F7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGC4Q9Y5F7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PCDHGC4Q9Y5F7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGC4Q9Y5F7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGC4Q9Y5F7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGC4Q9Y5F7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGC4Q9Y5F7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHGC4Q9Y5F7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGC4Q9Y5F7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDHGC4Q9Y5F7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
PCDHGC4Q9Y5F7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC4Q9Y5F7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC4Q9Y5F7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDHGC4Q9Y5F7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDHGC4Q9Y5F7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC4Q9Y5F7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDHGC4Q9Y5F7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC4Q9Y5F7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGC4Q9Y5F7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGC4Q9Y5F7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
PCDHGC4Q9Y5F7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.77■■□□□ 1.24
PCDHGC4Q9Y5F7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC4Q9Y5F7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC4Q9Y5F7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
PCDHGC4Q9Y5F7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHGC4Q9Y5F7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDHGC4Q9Y5F7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGC4Q9Y5F7 AC008406.3-201ENST00000620001 1374 ntBASIC22.76■■□□□ 1.23
PCDHGC4Q9Y5F7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGC4Q9Y5F7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGC4Q9Y5F7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGC4Q9Y5F7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGC4Q9Y5F7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
PCDHGC4Q9Y5F7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
PCDHGC4Q9Y5F7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
PCDHGC4Q9Y5F7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDHGC4Q9Y5F7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
PCDHGC4Q9Y5F7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
PCDHGC4Q9Y5F7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGC4Q9Y5F7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGC4Q9Y5F7 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHGC4Q9Y5F7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHGC4Q9Y5F7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGC4Q9Y5F7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDHGC4Q9Y5F7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
PCDHGC4Q9Y5F7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
PCDHGC4Q9Y5F7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDHGC4Q9Y5F7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGC4Q9Y5F7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGC4Q9Y5F7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms