Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.65■□□□□ 0.74
DUX4Q9UBX2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DUX4Q9UBX2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DUX4Q9UBX2 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.65■□□□□ 0.74
DUX4Q9UBX2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DUX4Q9UBX2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
DUX4Q9UBX2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DUX4Q9UBX2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
DUX4Q9UBX2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
DUX4Q9UBX2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.64■□□□□ 0.73
DUX4Q9UBX2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.64■□□□□ 0.73
DUX4Q9UBX2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.64■□□□□ 0.73
DUX4Q9UBX2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
DUX4Q9UBX2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
DUX4Q9UBX2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.64■□□□□ 0.73
DUX4Q9UBX2 AL024507.2-201ENST00000606070 2574 ntBASIC19.64■□□□□ 0.73
DUX4Q9UBX2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.64■□□□□ 0.73
DUX4Q9UBX2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.63■□□□□ 0.73
DUX4Q9UBX2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DUX4Q9UBX2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.63■□□□□ 0.73
DUX4Q9UBX2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DUX4Q9UBX2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
DUX4Q9UBX2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DUX4Q9UBX2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DUX4Q9UBX2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DUX4Q9UBX2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DUX4Q9UBX2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
DUX4Q9UBX2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DUX4Q9UBX2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.62■□□□□ 0.73
DUX4Q9UBX2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DUX4Q9UBX2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DUX4Q9UBX2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
DUX4Q9UBX2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DUX4Q9UBX2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DUX4Q9UBX2 AL592295.1-201ENST00000400984 884 ntBASIC19.61■□□□□ 0.73
DUX4Q9UBX2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DUX4Q9UBX2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DUX4Q9UBX2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DUX4Q9UBX2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DUX4Q9UBX2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DUX4Q9UBX2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DUX4Q9UBX2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
DUX4Q9UBX2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 MIR4508-201ENST00000584178 70 ntBASIC19.6■□□□□ 0.73
DUX4Q9UBX2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DUX4Q9UBX2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DUX4Q9UBX2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DUX4Q9UBX2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DUX4Q9UBX2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DUX4Q9UBX2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.59■□□□□ 0.73
DUX4Q9UBX2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
DUX4Q9UBX2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DUX4Q9UBX2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
DUX4Q9UBX2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.58■□□□□ 0.73
DUX4Q9UBX2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DUX4Q9UBX2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.58■□□□□ 0.73
DUX4Q9UBX2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
DUX4Q9UBX2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DUX4Q9UBX2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DUX4Q9UBX2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
DUX4Q9UBX2 YBX1P4-201ENST00000392794 808 ntBASIC19.58■□□□□ 0.72
DUX4Q9UBX2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.58■□□□□ 0.72
DUX4Q9UBX2 AC103724.3-201ENST00000564481 992 ntBASIC19.58■□□□□ 0.72
DUX4Q9UBX2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DUX4Q9UBX2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
DUX4Q9UBX2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
DUX4Q9UBX2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
DUX4Q9UBX2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.58■□□□□ 0.72
DUX4Q9UBX2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DUX4Q9UBX2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DUX4Q9UBX2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.57■□□□□ 0.72
DUX4Q9UBX2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DUX4Q9UBX2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DUX4Q9UBX2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.57■□□□□ 0.72
DUX4Q9UBX2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DUX4Q9UBX2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DUX4Q9UBX2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms