Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 AL138725.1-201ENST00000407347 1314 ntBASIC13.54□□□□□ -0.24
LPCAT4Q643R3 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 AC134407.3-201ENST00000624035 2139 ntBASIC13.54□□□□□ -0.24
LPCAT4Q643R3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.54□□□□□ -0.24
LPCAT4Q643R3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 AL161932.2-201ENST00000435436 679 ntBASIC13.53□□□□□ -0.24
LPCAT4Q643R3 MKNK2P1-201ENST00000437526 628 ntBASIC13.53□□□□□ -0.24
LPCAT4Q643R3 RBPMS2P1-201ENST00000437762 623 ntBASIC13.53□□□□□ -0.24
LPCAT4Q643R3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 SPDYE14P-201ENST00000442619 822 ntBASIC13.53□□□□□ -0.24
LPCAT4Q643R3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 C20orf181-201ENST00000623918 480 ntBASIC13.53□□□□□ -0.24
LPCAT4Q643R3 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC13.53□□□□□ -0.24
LPCAT4Q643R3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.52□□□□□ -0.24
LPCAT4Q643R3 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms