RNA–Protein interactions for RNA: ENST00000349441.6

IFT122-204, Transcript of intraflagellar transport 122, humanhuman

TSL 1 (best) BASIC

Gene IFT122, Length 3,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT122-204ENST00000349441 NISCHQ9Y2I1 1504 aa25.08■■□□□ 1.61
IFT122-204ENST00000349441 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
IFT122-204ENST00000349441 HRCP23327 699 aa21.97■■□□□ 1.11
IFT122-204ENST00000349441 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.09
IFT122-204ENST00000349441 SUPT5HO00267 1087 aaKnown RBP21.77■■□□□ 1.07
IFT122-204ENST00000349441 PPARGC1BQ86YN6 1023 aaKnown RBP21.64■■□□□ 1.05
IFT122-204ENST00000349441 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
IFT122-204ENST00000349441 PCGF6Q9BYE7 350 aa21.52■■□□□ 1.04
IFT122-204ENST00000349441 ZCCHC6Q5VYS8 1495 aaKnown RBP21.37■■□□□ 1.01
IFT122-204ENST00000349441 DCAF1Q9Y4B6 1507 aa21.17■□□□□ 0.98
IFT122-204ENST00000349441 LOC105371045A0A1W2PR82 267 aa21.04■□□□□ 0.96
IFT122-204ENST00000349441 CCDC180Q9P1Z9 1646 aa20.94■□□□□ 0.94
IFT122-204ENST00000349441 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
IFT122-204ENST00000349441 SCAF1Q9H7N4 1312 aaKnown RBP20.81■□□□□ 0.92
IFT122-204ENST00000349441 PELP1Q8IZL8 1130 aaKnown RBP20.71■□□□□ 0.91
IFT122-204ENST00000349441 DCAF8L2P0C7V8 631 aa20.52■□□□□ 0.88
IFT122-204ENST00000349441 ZEB1P37275 1124 aaPredicted RBP20.46■□□□□ 0.87
IFT122-204ENST00000349441 ABCC9O60706 1549 aa20.31■□□□□ 0.84
IFT122-204ENST00000349441 NEUROD1Q13562 356 aa20.24■□□□□ 0.83
IFT122-204ENST00000349441 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
IFT122-204ENST00000349441 RSF1Q96T23 1441 aaPredicted RBP20.16■□□□□ 0.82
IFT122-204ENST00000349441 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
IFT122-204ENST00000349441 FAM9AQ8IZU1 332 aaPredicted RBP20.11■□□□□ 0.81
IFT122-204ENST00000349441 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
IFT122-204ENST00000349441 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
IFT122-204ENST00000349441 GTF3C3Q9Y5Q9 886 aa20.02■□□□□ 0.8
IFT122-204ENST00000349441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
IFT122-204ENST00000349441 SCRIBQ14160 1630 aa19.88■□□□□ 0.77
IFT122-204ENST00000349441 DIEXFQ68CQ4 756 aaKnown RBP19.87■□□□□ 0.77
IFT122-204ENST00000349441 CCER1Q8TC90 406 aaPredicted RBP19.82■□□□□ 0.76
IFT122-204ENST00000349441 MYT1Q01538 1121 aa19.75■□□□□ 0.75
IFT122-204ENST00000349441 CENPBP07199 599 aaPredicted RBP19.71■□□□□ 0.75
IFT122-204ENST00000349441 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
IFT122-204ENST00000349441 CECR2Q9BXF3 1484 aa19.68■□□□□ 0.74
IFT122-204ENST00000349441 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
IFT122-204ENST00000349441 WIZO95785 1651 aa19.61■□□□□ 0.73
IFT122-204ENST00000349441 WRNQ14191 1432 aaPredicted RBP eCLIP19.58■□□□□ 0.73
IFT122-204ENST00000349441 TTBK1Q5TCY1 1321 aaPredicted RBP19.52■□□□□ 0.72
IFT122-204ENST00000349441 ZNF316A6NFI3 1004 aaPredicted RBP19.52■□□□□ 0.72
IFT122-204ENST00000349441 YTHDC1Q96MU7 727 aaKnown RBP19.5■□□□□ 0.71
IFT122-204ENST00000349441 MIER1Q8N108 512 aa19.49■□□□□ 0.71
IFT122-204ENST00000349441 CEP162Q5TB80 1403 aa19.45■□□□□ 0.7
IFT122-204ENST00000349441 CCDC88BA6NC98 1476 aa19.43■□□□□ 0.7
IFT122-204ENST00000349441 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
IFT122-204ENST00000349441 BAZ1AQ9NRL2 1556 aaPredicted RBP19.42■□□□□ 0.7
IFT122-204ENST00000349441 NACADO15069 1562 aa19.34■□□□□ 0.69
IFT122-204ENST00000349441 SOGA1O94964 1423 aa19.34■□□□□ 0.69
IFT122-204ENST00000349441 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
IFT122-204ENST00000349441 TNIKQ9UKE5 1360 aa19.3■□□□□ 0.68
IFT122-204ENST00000349441 SMARCA2P51531 1590 aa19.16■□□□□ 0.66
IFT122-204ENST00000349441 SUPT16HQ9Y5B9 1047 aaKnown RBP19.14■□□□□ 0.65
IFT122-204ENST00000349441 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
IFT122-204ENST00000349441 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
IFT122-204ENST00000349441 CSRNP3Q8WYN3 585 aa19.08■□□□□ 0.65
IFT122-204ENST00000349441 TSHZ2Q9NRE2 1034 aa19.06■□□□□ 0.64
IFT122-204ENST00000349441 GOLGA3Q08378 1498 aa19.04■□□□□ 0.64
IFT122-204ENST00000349441 UBTFP17480 764 aaKnown RBP19.02■□□□□ 0.63
IFT122-204ENST00000349441 EEA1Q15075 1411 aa19.02■□□□□ 0.63
IFT122-204ENST00000349441 SMARCA4P51532 1647 aa18.99■□□□□ 0.63
IFT122-204ENST00000349441 CLIP1P30622 1438 aa18.95■□□□□ 0.62
IFT122-204ENST00000349441 ANP32EQ9BTT0 268 aa18.92■□□□□ 0.62
IFT122-204ENST00000349441 KIF21BO75037 1637 aa18.92■□□□□ 0.62
IFT122-204ENST00000349441 DHX57Q6P158 1386 aaKnown RBP18.91■□□□□ 0.62
IFT122-204ENST00000349441 VPS8Q8N3P4 1428 aa18.9■□□□□ 0.62
IFT122-204ENST00000349441 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
IFT122-204ENST00000349441 CLSPNQ9HAW4 1339 aa18.86■□□□□ 0.61
IFT122-204ENST00000349441 KCNH8Q96L42 1107 aa18.86■□□□□ 0.61
IFT122-204ENST00000349441 CEP164Q9UPV0 1460 aa18.85■□□□□ 0.61
IFT122-204ENST00000349441 BCL11AQ9H165 835 aa18.84■□□□□ 0.61
IFT122-204ENST00000349441 RAPGEF2Q9Y4G8 1499 aa18.8■□□□□ 0.6
IFT122-204ENST00000349441 UNC13AQ9UPW8 1703 aa18.77■□□□□ 0.6
IFT122-204ENST00000349441 BAZ1BQ9UIG0 1483 aaKnown RBP18.73■□□□□ 0.59
IFT122-204ENST00000349441 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
IFT122-204ENST00000349441 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
IFT122-204ENST00000349441 BCANQ96GW7 911 aa18.65■□□□□ 0.58
IFT122-204ENST00000349441 CUX2O14529 1486 aa18.64■□□□□ 0.57
IFT122-204ENST00000349441 RANGAP1P46060 587 aaPredicted RBP18.62■□□□□ 0.57
IFT122-204ENST00000349441 RRBP1Q9P2E9 1410 aaKnown RBP18.6■□□□□ 0.57
IFT122-204ENST00000349441 MAPKBP1O60336 1514 aa18.6■□□□□ 0.57
IFT122-204ENST00000349441 FKBP8Q14318 412 aa18.55■□□□□ 0.56
IFT122-204ENST00000349441 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
IFT122-204ENST00000349441 RBM19Q9Y4C8 960 aaKnown RBP18.55■□□□□ 0.56
IFT122-204ENST00000349441 APLP2Q06481 763 aa18.54■□□□□ 0.56
IFT122-204ENST00000349441 MSH5O43196 834 aa18.54■□□□□ 0.56
IFT122-204ENST00000349441 WDR97A6NE52 1622 aa18.49■□□□□ 0.55
IFT122-204ENST00000349441 PRXQ9BXM0 1461 aa18.48■□□□□ 0.55
IFT122-204ENST00000349441 TOP2BQ02880 1626 aa18.47■□□□□ 0.55
IFT122-204ENST00000349441 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
IFT122-204ENST00000349441 BICRAQ9NZM4 1560 aa18.44■□□□□ 0.54
IFT122-204ENST00000349441 PPP1R15AO75807 674 aaPredicted RBP18.43■□□□□ 0.54
IFT122-204ENST00000349441 ITGAEP38570 1179 aa18.43■□□□□ 0.54
IFT122-204ENST00000349441 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
IFT122-204ENST00000349441 CCNB3Q8WWL7 1395 aa18.41■□□□□ 0.54
IFT122-204ENST00000349441 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
IFT122-204ENST00000349441 DDX10Q13206 875 aaKnown RBP18.41■□□□□ 0.54
IFT122-204ENST00000349441 ARHGAP35Q9NRY4 1499 aa18.35■□□□□ 0.53
IFT122-204ENST00000349441 TRIM52Q96A61 297 aa18.34■□□□□ 0.53
IFT122-204ENST00000349441 SIN3AQ96ST3 1273 aa18.34■□□□□ 0.53
IFT122-204ENST00000349441 HIRIP3Q9BW71 556 aaPredicted RBP18.31■□□□□ 0.52
IFT122-204ENST00000349441 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms