RNA–Protein interactions for RNA: ENST00000374242.8

INIP-203, Transcript of INTS3 and NABP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene INIP, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INIP-203ENST00000374242 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
INIP-203ENST00000374242 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
INIP-203ENST00000374242 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
INIP-203ENST00000374242 SHROOM4Q9ULL8 1493 aa21.6■■□□□ 1.05
INIP-203ENST00000374242 PCGF6Q9BYE7 350 aa21.38■■□□□ 1.01
INIP-203ENST00000374242 HRCP23327 699 aa21.28■■□□□ 1
INIP-203ENST00000374242 PPARGC1BQ86YN6 1023 aaKnown RBP21.12■□□□□ 0.97
INIP-203ENST00000374242 PELP1Q8IZL8 1130 aaKnown RBP20.71■□□□□ 0.91
INIP-203ENST00000374242 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
INIP-203ENST00000374242 LOC105371045A0A1W2PR82 267 aa20.53■□□□□ 0.88
INIP-203ENST00000374242 EHMT2Q96KQ7 1210 aa20.53■□□□□ 0.88
INIP-203ENST00000374242 TRIM26Q12899 539 aaPredicted RBP20.37■□□□□ 0.85
INIP-203ENST00000374242 ZEB1P37275 1124 aaPredicted RBP20.29■□□□□ 0.84
INIP-203ENST00000374242 MYO15BQ96JP2 1530 aa20.29■□□□□ 0.84
INIP-203ENST00000374242 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
INIP-203ENST00000374242 SCAF1Q9H7N4 1312 aaKnown RBP20.12■□□□□ 0.81
INIP-203ENST00000374242 CENPBP07199 599 aaPredicted RBP20■□□□□ 0.79
INIP-203ENST00000374242 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
INIP-203ENST00000374242 TTBK1Q5TCY1 1321 aaPredicted RBP19.97■□□□□ 0.79
INIP-203ENST00000374242 MYT1Q01538 1121 aa19.94■□□□□ 0.78
INIP-203ENST00000374242 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
INIP-203ENST00000374242 YTHDC1Q96MU7 727 aaKnown RBP19.86■□□□□ 0.77
INIP-203ENST00000374242 DCAF1Q9Y4B6 1507 aa19.85■□□□□ 0.77
INIP-203ENST00000374242 GTF3C3Q9Y5Q9 886 aa19.85■□□□□ 0.77
INIP-203ENST00000374242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
INIP-203ENST00000374242 ACIN1Q9UKV3 1341 aaKnown RBP19.78■□□□□ 0.76
INIP-203ENST00000374242 NEUROD1Q13562 356 aa19.73■□□□□ 0.75
INIP-203ENST00000374242 DIEXFQ68CQ4 756 aaKnown RBP19.69■□□□□ 0.74
INIP-203ENST00000374242 ABCC9O60706 1549 aa19.68■□□□□ 0.74
INIP-203ENST00000374242 CCDC180Q9P1Z9 1646 aa19.52■□□□□ 0.71
INIP-203ENST00000374242 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
INIP-203ENST00000374242 ZNF316A6NFI3 1004 aaPredicted RBP19.19■□□□□ 0.66
INIP-203ENST00000374242 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
INIP-203ENST00000374242 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
INIP-203ENST00000374242 RANGAP1P46060 587 aaPredicted RBP19.12■□□□□ 0.65
INIP-203ENST00000374242 PABPN1Q86U42 306 aaKnown RBP eCLIP19.11■□□□□ 0.65
INIP-203ENST00000374242 APLP2Q06481 763 aa19.08■□□□□ 0.65
INIP-203ENST00000374242 MIER1Q8N108 512 aa19.05■□□□□ 0.64
INIP-203ENST00000374242 BCANQ96GW7 911 aa18.92■□□□□ 0.62
INIP-203ENST00000374242 SCRIBQ14160 1630 aa18.83■□□□□ 0.6
INIP-203ENST00000374242 ERICH6Q7L0X2 663 aa18.77■□□□□ 0.6
INIP-203ENST00000374242 NEFLP07196 543 aa18.76■□□□□ 0.59
INIP-203ENST00000374242 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
INIP-203ENST00000374242 RB1CC1Q8TDY2 1594 aa18.73■□□□□ 0.59
INIP-203ENST00000374242 NACADO15069 1562 aa18.72■□□□□ 0.59
INIP-203ENST00000374242 ITGAEP38570 1179 aa18.66■□□□□ 0.58
INIP-203ENST00000374242 ANP32EQ9BTT0 268 aa18.66■□□□□ 0.58
INIP-203ENST00000374242 SUPT16HQ9Y5B9 1047 aaKnown RBP18.65■□□□□ 0.58
INIP-203ENST00000374242 BCL11AQ9H165 835 aa18.62■□□□□ 0.57
INIP-203ENST00000374242 FKBP8Q14318 412 aa18.56■□□□□ 0.56
INIP-203ENST00000374242 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
INIP-203ENST00000374242 TSHZ2Q9NRE2 1034 aa18.5■□□□□ 0.55
INIP-203ENST00000374242 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
INIP-203ENST00000374242 CLSPNQ9HAW4 1339 aa18.49■□□□□ 0.55
INIP-203ENST00000374242 TRIM52Q96A61 297 aa18.34■□□□□ 0.53
INIP-203ENST00000374242 DDX10Q13206 875 aaKnown RBP18.34■□□□□ 0.53
INIP-203ENST00000374242 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
INIP-203ENST00000374242 CECR2Q9BXF3 1484 aa18.28■□□□□ 0.52
INIP-203ENST00000374242 TNIKQ9UKE5 1360 aa18.27■□□□□ 0.52
INIP-203ENST00000374242 KCNH8Q96L42 1107 aa18.25■□□□□ 0.51
INIP-203ENST00000374242 SOGA1O94964 1423 aa18.25■□□□□ 0.51
INIP-203ENST00000374242 HIRIP3Q9BW71 556 aaPredicted RBP18.23■□□□□ 0.51
INIP-203ENST00000374242 CDK11AQ9UQ88 783 aaPredicted RBP18.23■□□□□ 0.51
INIP-203ENST00000374242 RBM19Q9Y4C8 960 aaKnown RBP18.23■□□□□ 0.51
INIP-203ENST00000374242 ANP32CO43423 234 aa18.21■□□□□ 0.51
INIP-203ENST00000374242 IRX6P78412 446 aaPredicted RBP18.21■□□□□ 0.51
INIP-203ENST00000374242 CCDC88BA6NC98 1476 aa18.17■□□□□ 0.5
INIP-203ENST00000374242 CLIP1P30622 1438 aa18.15■□□□□ 0.5
INIP-203ENST00000374242 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
INIP-203ENST00000374242 ABCC8Q09428 1581 aa18.13■□□□□ 0.49
INIP-203ENST00000374242 CNGB1Q14028 1251 aaPredicted RBP18.12■□□□□ 0.49
INIP-203ENST00000374242 FAM50AQ14320 339 aaKnown RBP18.12■□□□□ 0.49
INIP-203ENST00000374242 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
INIP-203ENST00000374242 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
INIP-203ENST00000374242 GOLGA3Q08378 1498 aa18.08■□□□□ 0.49
INIP-203ENST00000374242 NBR1Q14596 966 aa18.06■□□□□ 0.48
INIP-203ENST00000374242 HNRNPUQ00839 825 aaKnown RBP eCLIP18.06■□□□□ 0.48
INIP-203ENST00000374242 RUSC2Q8N2Y8 1516 aa18.01■□□□□ 0.47
INIP-203ENST00000374242 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
INIP-203ENST00000374242 BAZ1BQ9UIG0 1483 aaKnown RBP17.99■□□□□ 0.47
INIP-203ENST00000374242 WIZO95785 1651 aa17.97■□□□□ 0.47
INIP-203ENST00000374242 EEA1Q15075 1411 aa17.97■□□□□ 0.47
INIP-203ENST00000374242 SIN3AQ96ST3 1273 aa17.96■□□□□ 0.47
INIP-203ENST00000374242 DHX57Q6P158 1386 aaKnown RBP17.93■□□□□ 0.46
INIP-203ENST00000374242 KANK4Q5T7N3 995 aaPredicted RBP17.92■□□□□ 0.46
INIP-203ENST00000374242 POLR3GLQ9BT43 218 aa17.9■□□□□ 0.46
INIP-203ENST00000374242 VPS8Q8N3P4 1428 aa17.89■□□□□ 0.45
INIP-203ENST00000374242 DEKP35659 375 aaKnown RBP17.88■□□□□ 0.45
INIP-203ENST00000374242 CEP164Q9UPV0 1460 aa17.86■□□□□ 0.45
INIP-203ENST00000374242 FAM9BQ8IZU0 186 aa17.84■□□□□ 0.45
INIP-203ENST00000374242 P3H3Q8IVL6 736 aa17.82■□□□□ 0.44
INIP-203ENST00000374242 MYT1LQ9UL68 1186 aa17.8■□□□□ 0.44
INIP-203ENST00000374242 B4GALNT3Q6L9W6 998 aa17.79■□□□□ 0.44
INIP-203ENST00000374242 NPM2Q86SE8 214 aaKnown RBP17.79■□□□□ 0.44
INIP-203ENST00000374242 MSH5O43196 834 aa17.77■□□□□ 0.44
INIP-203ENST00000374242 ANP32AP39687 249 aaKnown RBP17.77■□□□□ 0.44
INIP-203ENST00000374242 FBLN2P98095 1184 aa17.77■□□□□ 0.44
INIP-203ENST00000374242 RTN4Q9NQC3 1192 aaKnown RBP17.76■□□□□ 0.43
INIP-203ENST00000374242 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
INIP-203ENST00000374242 SENP3-EIF4A1A0A087X0R7 540 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms