RNA–Protein interactions for RNA: ENST00000521028.3

HOTTIP-203, HOXA distal transcript antisense RNA, humanhuman

TSL 5 BASIC

Gene HOTTIP, Length 3,345 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTTIP-203ENST00000521028 NISCHQ9Y2I1 1504 aa26.3■■□□□ 1.8
HOTTIP-203ENST00000521028 CCDC180Q9P1Z9 1646 aa22.63■■□□□ 1.21
HOTTIP-203ENST00000521028 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
HOTTIP-203ENST00000521028 SHROOM4Q9ULL8 1493 aa22.06■■□□□ 1.12
HOTTIP-203ENST00000521028 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
HOTTIP-203ENST00000521028 PPARGC1BQ86YN6 1023 aaKnown RBP21.65■■□□□ 1.06
HOTTIP-203ENST00000521028 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
HOTTIP-203ENST00000521028 PCGF6Q9BYE7 350 aa21.5■■□□□ 1.03
HOTTIP-203ENST00000521028 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
HOTTIP-203ENST00000521028 ABCC9O60706 1549 aa21.4■■□□□ 1.02
HOTTIP-203ENST00000521028 HRCP23327 699 aa21.29■■□□□ 1
HOTTIP-203ENST00000521028 SCRIBQ14160 1630 aa21.14■□□□□ 0.98
HOTTIP-203ENST00000521028 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
HOTTIP-203ENST00000521028 NACADO15069 1562 aa21■□□□□ 0.95
HOTTIP-203ENST00000521028 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
HOTTIP-203ENST00000521028 EHMT2Q96KQ7 1210 aa20.76■□□□□ 0.91
HOTTIP-203ENST00000521028 PELP1Q8IZL8 1130 aaKnown RBP20.63■□□□□ 0.89
HOTTIP-203ENST00000521028 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
HOTTIP-203ENST00000521028 UNC13AQ9UPW8 1703 aa20.59■□□□□ 0.89
HOTTIP-203ENST00000521028 CECR2Q9BXF3 1484 aa20.58■□□□□ 0.89
HOTTIP-203ENST00000521028 SCAF1Q9H7N4 1312 aaKnown RBP20.54■□□□□ 0.88
HOTTIP-203ENST00000521028 LOC105371045A0A1W2PR82 267 aa20.53■□□□□ 0.88
HOTTIP-203ENST00000521028 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
HOTTIP-203ENST00000521028 MROH2BQ7Z745 1585 aa20.45■□□□□ 0.86
HOTTIP-203ENST00000521028 WIZO95785 1651 aa20.34■□□□□ 0.85
HOTTIP-203ENST00000521028 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
HOTTIP-203ENST00000521028 BICRAQ9NZM4 1560 aa20.3■□□□□ 0.84
HOTTIP-203ENST00000521028 BAZ1AQ9NRL2 1556 aaPredicted RBP20.22■□□□□ 0.83
HOTTIP-203ENST00000521028 FAM9AQ8IZU1 332 aaPredicted RBP20.18■□□□□ 0.82
HOTTIP-203ENST00000521028 TTBK1Q5TCY1 1321 aaPredicted RBP20.17■□□□□ 0.82
HOTTIP-203ENST00000521028 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
HOTTIP-203ENST00000521028 YTHDC1Q96MU7 727 aaKnown RBP20.15■□□□□ 0.82
HOTTIP-203ENST00000521028 GTF3C3Q9Y5Q9 886 aa20.1■□□□□ 0.81
HOTTIP-203ENST00000521028 TRIM26Q12899 539 aaPredicted RBP20.02■□□□□ 0.8
HOTTIP-203ENST00000521028 NEUROD1Q13562 356 aa20.02■□□□□ 0.8
HOTTIP-203ENST00000521028 TOP2AP11388 1531 aaKnown RBP19.96■□□□□ 0.79
HOTTIP-203ENST00000521028 TRIM41Q8WV44 630 aa19.89■□□□□ 0.77
HOTTIP-203ENST00000521028 CCDC88BA6NC98 1476 aa19.87■□□□□ 0.77
HOTTIP-203ENST00000521028 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
HOTTIP-203ENST00000521028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
HOTTIP-203ENST00000521028 EIF4G1Q04637 1599 aaKnown RBP19.84■□□□□ 0.77
HOTTIP-203ENST00000521028 ACIN1Q9UKV3 1341 aaKnown RBP19.83■□□□□ 0.77
HOTTIP-203ENST00000521028 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
HOTTIP-203ENST00000521028 CCER1Q8TC90 406 aaPredicted RBP19.78■□□□□ 0.76
HOTTIP-203ENST00000521028 CENPBP07199 599 aaPredicted RBP19.76■□□□□ 0.75
HOTTIP-203ENST00000521028 ATAD2BQ9ULI0 1458 aa19.75■□□□□ 0.75
HOTTIP-203ENST00000521028 ZEB1P37275 1124 aaPredicted RBP19.72■□□□□ 0.75
HOTTIP-203ENST00000521028 MYT1Q01538 1121 aa19.72■□□□□ 0.75
HOTTIP-203ENST00000521028 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
HOTTIP-203ENST00000521028 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
HOTTIP-203ENST00000521028 DIEXFQ68CQ4 756 aaKnown RBP19.62■□□□□ 0.73
HOTTIP-203ENST00000521028 NCAPD3P42695 1498 aa19.43■□□□□ 0.7
HOTTIP-203ENST00000521028 HMGXB3Q12766 1538 aa19.4■□□□□ 0.7
HOTTIP-203ENST00000521028 SOGA1O94964 1423 aa19.37■□□□□ 0.69
HOTTIP-203ENST00000521028 WRNQ14191 1432 aaPredicted RBP eCLIP19.36■□□□□ 0.69
HOTTIP-203ENST00000521028 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
HOTTIP-203ENST00000521028 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
HOTTIP-203ENST00000521028 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
HOTTIP-203ENST00000521028 BCANQ96GW7 911 aa19.23■□□□□ 0.67
HOTTIP-203ENST00000521028 BCL11AQ9H165 835 aa19.18■□□□□ 0.66
HOTTIP-203ENST00000521028 CSRNP3Q8WYN3 585 aa19.15■□□□□ 0.66
HOTTIP-203ENST00000521028 CFTRP13569 1480 aa19.14■□□□□ 0.65
HOTTIP-203ENST00000521028 TOP2BQ02880 1626 aa19.12■□□□□ 0.65
HOTTIP-203ENST00000521028 MIER1Q8N108 512 aa19.11■□□□□ 0.65
HOTTIP-203ENST00000521028 EEA1Q15075 1411 aa19.09■□□□□ 0.65
HOTTIP-203ENST00000521028 BIVM-ERCC5R4GMW8 1640 aa19.08■□□□□ 0.64
HOTTIP-203ENST00000521028 CUX1P39880 1505 aa19.07■□□□□ 0.64
HOTTIP-203ENST00000521028 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
HOTTIP-203ENST00000521028 PRDM2Q13029 1718 aa19.03■□□□□ 0.64
HOTTIP-203ENST00000521028 UBTFP17480 764 aaKnown RBP19.02■□□□□ 0.64
HOTTIP-203ENST00000521028 HNRNPUL2Q1KMD3 747 aaKnown RBP19.02■□□□□ 0.63
HOTTIP-203ENST00000521028 CADPSQ9ULU8 1353 aa19.01■□□□□ 0.63
HOTTIP-203ENST00000521028 CEP162Q5TB80 1403 aa19■□□□□ 0.63
HOTTIP-203ENST00000521028 DNAJC5BQ9UF47 199 aa18.99■□□□□ 0.63
HOTTIP-203ENST00000521028 TNIKQ9UKE5 1360 aa18.98■□□□□ 0.63
HOTTIP-203ENST00000521028 GOLGA3Q08378 1498 aa18.98■□□□□ 0.63
HOTTIP-203ENST00000521028 NESP48681 1621 aa18.94■□□□□ 0.62
HOTTIP-203ENST00000521028 KIF21BO75037 1637 aa18.93■□□□□ 0.62
HOTTIP-203ENST00000521028 ZNF316A6NFI3 1004 aaPredicted RBP18.93■□□□□ 0.62
HOTTIP-203ENST00000521028 CEP164Q9UPV0 1460 aa18.92■□□□□ 0.62
HOTTIP-203ENST00000521028 RAPGEF2Q9Y4G8 1499 aa18.92■□□□□ 0.62
HOTTIP-203ENST00000521028 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
HOTTIP-203ENST00000521028 ANP32EQ9BTT0 268 aa18.82■□□□□ 0.6
HOTTIP-203ENST00000521028 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
HOTTIP-203ENST00000521028 KIF27Q86VH2 1401 aa18.78■□□□□ 0.6
HOTTIP-203ENST00000521028 PRXQ9BXM0 1461 aa18.77■□□□□ 0.6
HOTTIP-203ENST00000521028 ITGAEP38570 1179 aa18.76■□□□□ 0.59
HOTTIP-203ENST00000521028 CUX2O14529 1486 aa18.75■□□□□ 0.59
HOTTIP-203ENST00000521028 CLIP1P30622 1438 aa18.75■□□□□ 0.59
HOTTIP-203ENST00000521028 SUPT16HQ9Y5B9 1047 aaKnown RBP18.72■□□□□ 0.59
HOTTIP-203ENST00000521028 ERICH3Q5RHP9 1530 aa18.7■□□□□ 0.58
HOTTIP-203ENST00000521028 LAMC3Q9Y6N6 1575 aa18.7■□□□□ 0.58
HOTTIP-203ENST00000521028 ERICH6Q7L0X2 663 aa18.69■□□□□ 0.58
HOTTIP-203ENST00000521028 TSHZ2Q9NRE2 1034 aa18.69■□□□□ 0.58
HOTTIP-203ENST00000521028 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
HOTTIP-203ENST00000521028 RAD54L2Q9Y4B4 1467 aa18.68■□□□□ 0.58
HOTTIP-203ENST00000521028 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
HOTTIP-203ENST00000521028 IGF1RP08069 1367 aa18.65■□□□□ 0.58
HOTTIP-203ENST00000521028 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.58
HOTTIP-203ENST00000521028 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms