Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.6□□□□□ -0.23
GABREP78334 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
GABREP78334 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
GABREP78334 LINC00528-201ENST00000600723 2160 ntBASIC13.6□□□□□ -0.23
GABREP78334 AC012073.1-201ENST00000606114 1108 ntBASIC13.6□□□□□ -0.23
GABREP78334 AL118522.1-201ENST00000611368 560 ntBASIC13.6□□□□□ -0.23
GABREP78334 AC090386.2-201ENST00000623010 1039 ntBASIC13.6□□□□□ -0.23
GABREP78334 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.6□□□□□ -0.23
GABREP78334 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
GABREP78334 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 AC025183.3-201ENST00000623526 1482 ntBASIC13.6□□□□□ -0.23
GABREP78334 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GABREP78334 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
GABREP78334 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
GABREP78334 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
GABREP78334 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.6□□□□□ -0.23
GABREP78334 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GABREP78334 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GABREP78334 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
GABREP78334 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
GABREP78334 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.59□□□□□ -0.23
GABREP78334 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.59□□□□□ -0.23
GABREP78334 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
GABREP78334 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.59□□□□□ -0.23
GABREP78334 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.59□□□□□ -0.23
GABREP78334 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.59□□□□□ -0.23
GABREP78334 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
GABREP78334 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.59□□□□□ -0.23
GABREP78334 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.59□□□□□ -0.23
GABREP78334 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC13.59□□□□□ -0.23
GABREP78334 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
GABREP78334 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.59□□□□□ -0.23
GABREP78334 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC13.59□□□□□ -0.23
GABREP78334 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC13.59□□□□□ -0.23
GABREP78334 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.59□□□□□ -0.23
GABREP78334 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
GABREP78334 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.59□□□□□ -0.23
GABREP78334 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.59□□□□□ -0.23
GABREP78334 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.59□□□□□ -0.23
GABREP78334 AL133467.4-201ENST00000602953 725 ntBASIC13.59□□□□□ -0.23
GABREP78334 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.59□□□□□ -0.23
GABREP78334 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.59□□□□□ -0.23
GABREP78334 MIR6746-201ENST00000620971 63 ntBASIC13.59□□□□□ -0.23
GABREP78334 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.59□□□□□ -0.23
GABREP78334 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.59□□□□□ -0.23
GABREP78334 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 AC104581.4-201ENST00000623126 3052 ntBASIC13.59□□□□□ -0.23
GABREP78334 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
GABREP78334 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
GABREP78334 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
GABREP78334 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
GABREP78334 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.59□□□□□ -0.23
GABREP78334 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GABREP78334 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
GABREP78334 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
GABREP78334 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
GABREP78334 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
GABREP78334 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
GABREP78334 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
GABREP78334 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
GABREP78334 CICP24-201ENST00000605464 2705 ntBASIC13.58□□□□□ -0.24
GABREP78334 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.58□□□□□ -0.24
GABREP78334 SBF1P1-201ENST00000444527 5631 ntBASIC13.58□□□□□ -0.24
GABREP78334 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GABREP78334 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
GABREP78334 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms