Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 HMGA1P1-201ENST00000415560 1062 ntBASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 AC010234.1-201ENST00000494599 870 ntBASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 OR2A1-AS1-210ENST00000496968 531 ntBASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 TRMT112P3-201ENST00000580149 358 ntBASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 AC005357.2-202ENST00000590507 1060 ntBASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 AC011247.3-201ENST00000603297 438 ntBASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 AC106881.1-201ENST00000605849 3329 ntBASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRAK1Q9UPV9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 DUT-208ENST00000559540 1441 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 AC006529.1-201ENST00000459978 637 ntBASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 RPS23-207ENST00000511844 530 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 TREHP1-201ENST00000531328 465 ntBASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 AC010976.2-201ENST00000609697 852 ntBASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 AL031673.1-201ENST00000611460 466 ntBASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 GOLGA8UP-201ENST00000527159 1755 ntBASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 AC068760.1-201ENST00000493579 1953 ntBASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAK1Q9UPV9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 AC015802.1-201ENST00000588104 1449 ntBASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 FUCA1P1-201ENST00000374476 1351 ntBASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC19.78■□□□□ 0.76
TRAK1Q9UPV9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms