Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC012617.1-204ENST00000586340 2305 ntBASIC12.75□□□□□ -0.37
APH1AQ96BI3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 ACTG1P2-201ENST00000415776 1125 ntBASIC12.74□□□□□ -0.37
APH1AQ96BI3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 ACTG1P11-201ENST00000425411 1125 ntBASIC12.74□□□□□ -0.37
APH1AQ96BI3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 AP001505.2-201ENST00000616815 443 ntBASIC12.74□□□□□ -0.37
APH1AQ96BI3 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 HSPA8P5-201ENST00000456928 2069 ntBASIC12.74□□□□□ -0.37
APH1AQ96BI3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.74□□□□□ -0.37
APH1AQ96BI3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
APH1AQ96BI3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.73□□□□□ -0.37
APH1AQ96BI3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 AP002353.1-201ENST00000528257 1599 ntBASIC12.73□□□□□ -0.37
APH1AQ96BI3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.73□□□□□ -0.37
APH1AQ96BI3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.73□□□□□ -0.37
APH1AQ96BI3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.73□□□□□ -0.37
APH1AQ96BI3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 AC020910.6-201ENST00000623084 1459 ntBASIC12.73□□□□□ -0.37
APH1AQ96BI3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APH1AQ96BI3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.73□□□□□ -0.37
APH1AQ96BI3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms