Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.13■□□□□ 0.01
GRIK1P39086 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.13■□□□□ 0.01
GRIK1P39086 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GRIK1P39086 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GRIK1P39086 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GRIK1P39086 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GRIK1P39086 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GRIK1P39086 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GRIK1P39086 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.13■□□□□ 0.01
GRIK1P39086 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GRIK1P39086 BRD7P5-201ENST00000299197 1822 ntBASIC15.13■□□□□ 0.01
GRIK1P39086 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GRIK1P39086 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.13■□□□□ 0.01
GRIK1P39086 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.12■□□□□ 0.01
GRIK1P39086 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
GRIK1P39086 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
GRIK1P39086 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GRIK1P39086 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GRIK1P39086 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GRIK1P39086 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.12■□□□□ 0.01
GRIK1P39086 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.12■□□□□ 0.01
GRIK1P39086 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GRIK1P39086 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.12■□□□□ 0.01
GRIK1P39086 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GRIK1P39086 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.12■□□□□ 0.01
GRIK1P39086 AL592076.1-201ENST00000424448 303 ntBASIC15.12■□□□□ 0.01
GRIK1P39086 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.12■□□□□ 0.01
GRIK1P39086 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.12■□□□□ 0.01
GRIK1P39086 ALG1L13P-202ENST00000519320 584 ntBASIC15.12■□□□□ 0.01
GRIK1P39086 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.12■□□□□ 0.01
GRIK1P39086 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GRIK1P39086 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
GRIK1P39086 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.12■□□□□ 0.01
GRIK1P39086 PRKXP1-201ENST00000561423 1122 ntBASIC15.12■□□□□ 0.01
GRIK1P39086 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.12■□□□□ 0.01
GRIK1P39086 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.12■□□□□ 0.01
GRIK1P39086 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
GRIK1P39086 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GRIK1P39086 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.12■□□□□ 0.01
GRIK1P39086 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
GRIK1P39086 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.11■□□□□ 0.01
GRIK1P39086 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
GRIK1P39086 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.11■□□□□ 0.01
GRIK1P39086 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
GRIK1P39086 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.11■□□□□ 0.01
GRIK1P39086 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.11■□□□□ 0.01
GRIK1P39086 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.11■□□□□ 0.01
GRIK1P39086 DUTP3-201ENST00000450025 415 ntBASIC15.11■□□□□ 0.01
GRIK1P39086 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.11■□□□□ 0.01
GRIK1P39086 AC114947.1-202ENST00000514136 344 ntBASIC15.11■□□□□ 0.01
GRIK1P39086 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.11■□□□□ 0.01
GRIK1P39086 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.11■□□□□ 0.01
GRIK1P39086 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.11■□□□□ 0.01
GRIK1P39086 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.11■□□□□ 0.01
GRIK1P39086 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.11■□□□□ 0.01
GRIK1P39086 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 AC007326.1-201ENST00000604539 458 ntBASIC15.11■□□□□ 0.01
GRIK1P39086 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.11■□□□□ 0.01
GRIK1P39086 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms