RNA–Protein interactions for RNA: ENST00000566343.5

ERVK13-1-204, Transcript of endogenous retrovirus group K13 member 1, humanhuman

TSL 4 BASIC

Gene ERVK13-1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVK13-1-204ENST00000566343 NISCHQ9Y2I1 1504 aa35.02■■■■□ 3.2
ERVK13-1-204ENST00000566343 CCDC180Q9P1Z9 1646 aa31.33■■■□□ 2.61
ERVK13-1-204ENST00000566343 ABCC9O60706 1549 aa30.83■■■□□ 2.53
ERVK13-1-204ENST00000566343 RB1CC1Q8TDY2 1594 aa29.61■■■□□ 2.33
ERVK13-1-204ENST00000566343 NACADO15069 1562 aa29.52■■■□□ 2.32
ERVK13-1-204ENST00000566343 MYO15BQ96JP2 1530 aa29.3■■■□□ 2.28
ERVK13-1-204ENST00000566343 DCAF8L2P0C7V8 631 aa29.24■■■□□ 2.27
ERVK13-1-204ENST00000566343 ZCCHC6Q5VYS8 1495 aaKnown RBP29.12■■■□□ 2.25
ERVK13-1-204ENST00000566343 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
ERVK13-1-204ENST00000566343 UNC13AQ9UPW8 1703 aa28.85■■■□□ 2.21
ERVK13-1-204ENST00000566343 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
ERVK13-1-204ENST00000566343 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
ERVK13-1-204ENST00000566343 DNAJC5BQ9UF47 199 aa28.52■■■□□ 2.16
ERVK13-1-204ENST00000566343 SHROOM4Q9ULL8 1493 aa28.51■■■□□ 2.15
ERVK13-1-204ENST00000566343 SCRIBQ14160 1630 aa28.45■■■□□ 2.14
ERVK13-1-204ENST00000566343 EIF4G1Q04637 1599 aaKnown RBP27.97■■■□□ 2.07
ERVK13-1-204ENST00000566343 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
ERVK13-1-204ENST00000566343 CECR2Q9BXF3 1484 aa27.78■■■□□ 2.04
ERVK13-1-204ENST00000566343 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
ERVK13-1-204ENST00000566343 NCAPD3P42695 1498 aa27.23■■□□□ 1.95
ERVK13-1-204ENST00000566343 BAZ1AQ9NRL2 1556 aaPredicted RBP27.19■■□□□ 1.94
ERVK13-1-204ENST00000566343 ATAD2BQ9ULI0 1458 aa27.17■■□□□ 1.94
ERVK13-1-204ENST00000566343 SMARCA2P51531 1590 aa27.17■■□□□ 1.94
ERVK13-1-204ENST00000566343 HMGXB3Q12766 1538 aa27.1■■□□□ 1.93
ERVK13-1-204ENST00000566343 PEG3Q9GZU2 1588 aa27.03■■□□□ 1.92
ERVK13-1-204ENST00000566343 BAZ1BQ9UIG0 1483 aaKnown RBP26.93■■□□□ 1.9
ERVK13-1-204ENST00000566343 MROH2BQ7Z745 1585 aa26.93■■□□□ 1.9
ERVK13-1-204ENST00000566343 ERCC6Q03468 1493 aa26.64■■□□□ 1.86
ERVK13-1-204ENST00000566343 WIZO95785 1651 aa26.6■■□□□ 1.85
ERVK13-1-204ENST00000566343 LAMC3Q9Y6N6 1575 aa26.57■■□□□ 1.84
ERVK13-1-204ENST00000566343 NESP48681 1621 aa26.57■■□□□ 1.84
ERVK13-1-204ENST00000566343 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
ERVK13-1-204ENST00000566343 CUX2O14529 1486 aa26.54■■□□□ 1.84
ERVK13-1-204ENST00000566343 CADPSQ9ULU8 1353 aa26.4■■□□□ 1.82
ERVK13-1-204ENST00000566343 PDS5BQ9NTI5 1447 aa26.39■■□□□ 1.82
ERVK13-1-204ENST00000566343 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.81
ERVK13-1-204ENST00000566343 THOC2Q8NI27 1593 aaKnown RBP26.31■■□□□ 1.8
ERVK13-1-204ENST00000566343 KIF21AQ7Z4S6 1674 aa26.27■■□□□ 1.8
ERVK13-1-204ENST00000566343 CFTRP13569 1480 aa26.19■■□□□ 1.78
ERVK13-1-204ENST00000566343 MRC2Q9UBG0 1479 aa26.13■■□□□ 1.77
ERVK13-1-204ENST00000566343 CEP164Q9UPV0 1460 aa26.1■■□□□ 1.77
ERVK13-1-204ENST00000566343 FANCD2Q9BXW9 1451 aa26.09■■□□□ 1.77
ERVK13-1-204ENST00000566343 WDR62O43379 1518 aa26.07■■□□□ 1.76
ERVK13-1-204ENST00000566343 CCDC88BA6NC98 1476 aa26.03■■□□□ 1.76
ERVK13-1-204ENST00000566343 DNAJC5Q9H3Z4 198 aa26.01■■□□□ 1.75
ERVK13-1-204ENST00000566343 PRDM2Q13029 1718 aa25.96■■□□□ 1.75
ERVK13-1-204ENST00000566343 URB2Q14146 1524 aaKnown RBP25.83■■□□□ 1.72
ERVK13-1-204ENST00000566343 ABCC8Q09428 1581 aa25.68■■□□□ 1.7
ERVK13-1-204ENST00000566343 TOPBP1Q92547 1522 aa25.63■■□□□ 1.69
ERVK13-1-204ENST00000566343 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
ERVK13-1-204ENST00000566343 IFT140Q96RY7 1462 aa25.58■■□□□ 1.69
ERVK13-1-204ENST00000566343 SUPT5HO00267 1087 aaKnown RBP25.52■■□□□ 1.68
ERVK13-1-204ENST00000566343 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
ERVK13-1-204ENST00000566343 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.65
ERVK13-1-204ENST00000566343 TARBP1Q13395 1621 aaKnown RBP25.37■■□□□ 1.65
ERVK13-1-204ENST00000566343 EIF4G3O43432 1585 aaKnown RBP25.34■■□□□ 1.65
ERVK13-1-204ENST00000566343 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
ERVK13-1-204ENST00000566343 CUX1P39880 1505 aa25.31■■□□□ 1.64
ERVK13-1-204ENST00000566343 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
ERVK13-1-204ENST00000566343 SOGA1O94964 1423 aa25.27■■□□□ 1.64
ERVK13-1-204ENST00000566343 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
ERVK13-1-204ENST00000566343 AQRO60306 1485 aaKnown RBP eCLIP25.22■■□□□ 1.63
ERVK13-1-204ENST00000566343 RAD54L2Q9Y4B4 1467 aa25.22■■□□□ 1.63
ERVK13-1-204ENST00000566343 TDRD9Q8NDG6 1382 aaKnown RBP25.12■■□□□ 1.61
ERVK13-1-204ENST00000566343 ABCA10Q8WWZ4 1543 aa25.06■■□□□ 1.6
ERVK13-1-204ENST00000566343 GRIN2BQ13224 1484 aa25.05■■□□□ 1.6
ERVK13-1-204ENST00000566343 CHD1O14646 1710 aa25.05■■□□□ 1.6
ERVK13-1-204ENST00000566343 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
ERVK13-1-204ENST00000566343 MAGI1Q96QZ7 1491 aaPredicted RBP25.04■■□□□ 1.6
ERVK13-1-204ENST00000566343 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
ERVK13-1-204ENST00000566343 BIVM-ERCC5R4GMW8 1640 aa25.03■■□□□ 1.6
ERVK13-1-204ENST00000566343 SNAPC4Q5SXM2 1469 aa25.02■■□□□ 1.6
ERVK13-1-204ENST00000566343 GAPVD1Q14C86 1478 aa24.99■■□□□ 1.59
ERVK13-1-204ENST00000566343 ABCA5Q8WWZ7 1642 aa24.97■■□□□ 1.59
ERVK13-1-204ENST00000566343 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
ERVK13-1-204ENST00000566343 FBLN2P98095 1184 aa24.95■■□□□ 1.58
ERVK13-1-204ENST00000566343 TRIM41Q8WV44 630 aa24.94■■□□□ 1.58
ERVK13-1-204ENST00000566343 PBRM1Q86U86 1689 aa24.94■■□□□ 1.58
ERVK13-1-204ENST00000566343 RIMBP3CA6NJZ7 1639 aa24.93■■□□□ 1.58
ERVK13-1-204ENST00000566343 RIMBP3BA6NNM3 1639 aa24.93■■□□□ 1.58
ERVK13-1-204ENST00000566343 RIMBP3Q9UFD9 1639 aa24.93■■□□□ 1.58
ERVK13-1-204ENST00000566343 SYNJ2O15056 1496 aa24.92■■□□□ 1.58
ERVK13-1-204ENST00000566343 ARHGEF11O15085 1522 aa24.91■■□□□ 1.58
ERVK13-1-204ENST00000566343 CHMP7Q8WUX9 453 aaPredicted RBP24.89■■□□□ 1.58
ERVK13-1-204ENST00000566343 CLASP1Q7Z460 1538 aa24.83■■□□□ 1.57
ERVK13-1-204ENST00000566343 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
ERVK13-1-204ENST00000566343 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
ERVK13-1-204ENST00000566343 GRIN2AQ12879 1464 aa24.71■■□□□ 1.55
ERVK13-1-204ENST00000566343 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
ERVK13-1-204ENST00000566343 ARAP1Q96P48 1450 aa24.69■■□□□ 1.54
ERVK13-1-204ENST00000566343 NUP160Q12769 1436 aa24.64■■□□□ 1.54
ERVK13-1-204ENST00000566343 CYB5RLQ6IPT4 315 aa24.63■■□□□ 1.53
ERVK13-1-204ENST00000566343 CEP170Q5SW79 1584 aa24.58■■□□□ 1.52
ERVK13-1-204ENST00000566343 KIF27Q86VH2 1401 aa24.57■■□□□ 1.52
ERVK13-1-204ENST00000566343 SHROOM2Q13796 1616 aa24.48■■□□□ 1.51
ERVK13-1-204ENST00000566343 CUL7Q14999 1698 aa24.47■■□□□ 1.51
ERVK13-1-204ENST00000566343 IGF1RP08069 1367 aa24.46■■□□□ 1.51
ERVK13-1-204ENST00000566343 RUSC2Q8N2Y8 1516 aa24.4■■□□□ 1.5
ERVK13-1-204ENST00000566343 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
ERVK13-1-204ENST00000566343 CARMIL1Q5VZK9 1371 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms