Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.571e-6■■□□□ 12.1
U2AF2P26368 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.5□□□□□ -1.211e-6■■□□□ 12.1
U2AF2P26368 TMEM50B-204ENST00000442441 982 ntTSL 1 (best)22.19■■□□□ 1.142e-8■■□□□ 12.1
U2AF2P26368 TMEM50B-203ENST00000441128 634 ntTSL 54.21□□□□□ -1.742e-8■■□□□ 12.1
U2AF2P26368 ATRX-224ENST00000637959 86 ntTSL 5-2.39□□□□□ -2.799e-8■■□□□ 12.1
U2AF2P26368 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.68■■□□□ 1.065e-7■■□□□ 12.1
U2AF2P26368 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.55e-7■■□□□ 12.1
U2AF2P26368 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.265e-7■■□□□ 12.1
U2AF2P26368 CNOT9-202ENST00000295701 1126 ntTSL 1 (best) BASIC10.12□□□□□ -0.795e-7■■□□□ 12.1
U2AF2P26368 EFTUD2-215ENST00000589825 600 ntTSL 217.94■□□□□ 0.461e-6■■□□□ 12.1
U2AF2P26368 SUCLG1-207ENST00000488234 275 ntTSL 36.05□□□□□ -1.441e-6■■□□□ 12.1
U2AF2P26368 ANO6-206ENST00000550630 835 ntTSL 320.1■□□□□ 0.812e-6■■□□□ 12.1
U2AF2P26368 ANO6-204ENST00000426898 2780 ntTSL 218.97■□□□□ 0.632e-6■■□□□ 12.1
U2AF2P26368 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.222e-6■■□□□ 12.1
U2AF2P26368 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.072e-6■■□□□ 12.1
U2AF2P26368 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.052e-6■■□□□ 12.1
U2AF2P26368 AC009248.2-201ENST00000619826 254 ntBASIC0.88□□□□□ -2.272e-6■■□□□ 12.1
U2AF2P26368 DHX35-202ENST00000373323 2347 ntTSL 2 BASIC13.19□□□□□ -0.36e-6■■□□□ 12
U2AF2P26368 DHX35-203ENST00000373325 3287 ntTSL 5 BASIC10.82□□□□□ -0.686e-6■■□□□ 12
U2AF2P26368 DHX35-206ENST00000484417 3318 ntTSL 29.85□□□□□ -0.836e-6■■□□□ 12
U2AF2P26368 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.966e-6■■□□□ 12
U2AF2P26368 AGFG2-203ENST00000430857 915 ntTSL 528.72■■■□□ 2.192e-9■■□□□ 12
U2AF2P26368 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.032e-9■■□□□ 12
U2AF2P26368 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.57■■□□□ 1.25e-8■■□□□ 12
U2AF2P26368 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.025e-8■■□□□ 12
U2AF2P26368 HSD17B12-211ENST00000636007 563 ntTSL 420.6■□□□□ 0.895e-8■■□□□ 12
U2AF2P26368 HSD17B12-206ENST00000531185 611 ntTSL 418.79■□□□□ 0.65e-8■■□□□ 12
U2AF2P26368 HSD17B12-205ENST00000527433 559 ntTSL 415.58■□□□□ 0.085e-8■■□□□ 12
U2AF2P26368 AC068205.2-203ENST00000529261 748 ntTSL 310.51□□□□□ -0.735e-8■■□□□ 12
U2AF2P26368 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.98□□□□□ -1.135e-8■■□□□ 12
U2AF2P26368 HSD17B12-214ENST00000638034 546 ntTSL 54.06□□□□□ -1.765e-8■■□□□ 12
U2AF2P26368 HSD17B12-204ENST00000527213 571 ntTSL 43.61□□□□□ -1.835e-8■■□□□ 12
U2AF2P26368 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.015e-7■■□□□ 12
U2AF2P26368 PHKB-202ENST00000323584 4283 ntTSL 1 (best) BASIC13.47□□□□□ -0.255e-7■■□□□ 12
U2AF2P26368 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC8.81□□□□□ -15e-7■■□□□ 12
U2AF2P26368 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.911e-9■■□□□ 12
U2AF2P26368 HERPUD1-210ENST00000565966 798 ntTSL 515.6■□□□□ 0.096e-8■■□□□ 12
U2AF2P26368 UGDH-211ENST00000515021 861 ntTSL 520.81■□□□□ 0.923e-9■■□□□ 12
U2AF2P26368 UGDH-210ENST00000514106 568 ntTSL 417.9■□□□□ 0.463e-9■■□□□ 12
U2AF2P26368 UGDH-212ENST00000515398 584 ntTSL 517.9■□□□□ 0.463e-9■■□□□ 12
U2AF2P26368 UGDH-203ENST00000503779 575 ntTSL 417.85■□□□□ 0.453e-9■■□□□ 12
U2AF2P26368 UGDH-207ENST00000509391 577 ntTSL 317.85■□□□□ 0.453e-9■■□□□ 12
U2AF2P26368 UGDH-209ENST00000510881 549 ntTSL 35.11□□□□□ -1.593e-9■■□□□ 12
U2AF2P26368 DENND4A-204ENST00000562028 481 ntTSL 33.01□□□□□ -1.931e-6■■□□□ 12
U2AF2P26368 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.03□□□□□ -2.41e-323■■□□□ 12
U2AF2P26368 ARHGEF10L-208ENST00000482892 539 ntTSL 312.09□□□□□ -0.473e-7■■□□□ 12
U2AF2P26368 R3HDM2-208ENST00000448732 195 ntTSL 1 (best)25.66■■□□□ 1.71e-10■■□□□ 12
U2AF2P26368 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.25■■□□□ 1.152e-6■■□□□ 12
U2AF2P26368 GIPR-203ENST00000585889 1414 ntTSL 1 (best)21.74■■□□□ 1.072e-6■■□□□ 12
U2AF2P26368 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.832e-6■■□□□ 12
U2AF2P26368 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.262e-6■■□□□ 12
U2AF2P26368 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.13e-7■■□□□ 12
U2AF2P26368 SF3A1-202ENST00000411423 548 ntTSL 421.32■■□□□ 14e-7■■□□□ 12
U2AF2P26368 SF3A1-204ENST00000447376 418 ntTSL 518.37■□□□□ 0.534e-7■■□□□ 12
U2AF2P26368 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.014e-7■■□□□ 12
U2AF2P26368 SF3A1-206ENST00000471037 555 ntTSL 310.12□□□□□ -0.794e-7■■□□□ 12
U2AF2P26368 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.055e-8■■□□□ 12
U2AF2P26368 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.68■□□□□ 0.262e-6■■□□□ 12
U2AF2P26368 SIRT5-204ENST00000397350 4382 ntTSL 1 (best) BASIC13.51□□□□□ -0.252e-6■■□□□ 12
U2AF2P26368 SIRT5-202ENST00000379250 3727 ntTSL 1 (best)11.4□□□□□ -0.582e-6■■□□□ 12
U2AF2P26368 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC11.26□□□□□ -0.612e-6■■□□□ 12
U2AF2P26368 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.682e-6■■□□□ 12
U2AF2P26368 AUP1-207ENST00000472800 663 ntTSL 422.39■■□□□ 1.172e-71■■□□□ 12
U2AF2P26368 NF1-210ENST00000479614 1114 ntTSL 56.13□□□□□ -1.431e-6■■□□□ 12
U2AF2P26368 NF1-206ENST00000466819 1177 ntTSL 54.25□□□□□ -1.731e-6■■□□□ 12
U2AF2P26368 ZFAS1-207ENST00000458653 596 ntTSL 231.82■■■□□ 2.684e-10■■□□□ 12
U2AF2P26368 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)28.06■■■□□ 2.084e-10■■□□□ 12
U2AF2P26368 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)26.39■■□□□ 1.824e-10■■□□□ 12
U2AF2P26368 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)24.44■■□□□ 1.54e-10■■□□□ 12
U2AF2P26368 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.44■■□□□ 1.54e-10■■□□□ 12
U2AF2P26368 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC11.53□□□□□ -0.564e-10■■□□□ 12
U2AF2P26368 ZFAS1-201ENST00000326677 504 ntTSL 1 (best)7.89□□□□□ -1.154e-10■■□□□ 12
U2AF2P26368 ZFAS1-204ENST00000428008 566 ntTSL 27.89□□□□□ -1.154e-10■■□□□ 12
U2AF2P26368 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.734e-7■■□□□ 12
U2AF2P26368 RBM5-212ENST00000464087 5616 ntTSL 29.1□□□□□ -0.954e-7■■□□□ 12
U2AF2P26368 MLLT10-206ENST00000420525 538 ntTSL 31.45□□□□□ -2.186e-8■■□□□ 12
U2AF2P26368 ARHGAP5-209ENST00000556191 654 ntTSL 40.52□□□□□ -2.334e-7■■□□□ 12
U2AF2P26368 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.62■□□□□ 0.259e-7■■□□□ 12
U2AF2P26368 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.11e-9■■□□□ 12
U2AF2P26368 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC9.78□□□□□ -0.849e-7■■□□□ 12
U2AF2P26368 SPDYA-205ENST00000462832 2081 ntTSL 25□□□□□ -1.611e-7■■□□□ 12
U2AF2P26368 SPPL3-208ENST00000543854 508 ntTSL 521.36■■□□□ 1.012e-6■■□□□ 12
U2AF2P26368 SPPL3-207ENST00000543608 636 ntTSL 317.99■□□□□ 0.472e-6■■□□□ 12
U2AF2P26368 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.342e-6■■□□□ 12
U2AF2P26368 SPPL3-204ENST00000536996 763 ntTSL 516.42■□□□□ 0.222e-6■■□□□ 12
U2AF2P26368 TUSC3-202ENST00000503191 731 ntTSL 35.77□□□□□ -1.492e-6■■□□□ 12
U2AF2P26368 SPPL3-205ENST00000540091 531 ntTSL 45.5□□□□□ -1.532e-6■■□□□ 12
U2AF2P26368 SPPL3-206ENST00000543181 663 ntTSL 32.63□□□□□ -1.992e-6■■□□□ 12
U2AF2P26368 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.46■■■□□ 2.152e-8■■□□□ 12
U2AF2P26368 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.042e-8■■□□□ 12
U2AF2P26368 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.982e-8■■□□□ 12
U2AF2P26368 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.592e-8■■□□□ 12
U2AF2P26368 DDX42-204ENST00000577940 1427 ntTSL 59.34□□□□□ -0.912e-8■■□□□ 12
U2AF2P26368 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.43□□□□□ -1.062e-8■■□□□ 12
U2AF2P26368 FLJ46284-204ENST00000623616 4282 nt5.22□□□□□ -1.572e-7■■□□□ 12
U2AF2P26368 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.76□□□□□ -0.858e-9■■□□□ 12
U2AF2P26368 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.878e-9■■□□□ 12
U2AF2P26368 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.715e-7■■□□□ 12
U2AF2P26368 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC15.33■□□□□ 0.045e-7■■□□□ 12
U2AF2P26368 PSMD2-206ENST00000439383 2633 ntTSL 2 BASIC12.93□□□□□ -0.345e-7■■□□□ 12
Retrieved 100 of 36,523 protein–RNA pairs in 206.6 ms