RNA–Protein interactions for RNA: ENST00000543181.5

SPPL3-206, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-206ENST00000543181 AEBP2Q6ZN18 517 aaPredicted RBP27.58■■■□□ 2.01
SPPL3-206ENST00000543181 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
SPPL3-206ENST00000543181 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
SPPL3-206ENST00000543181 PHF23Q9BUL5 403 aaPredicted RBP23.28■■□□□ 1.32
SPPL3-206ENST00000543181 FOXD1Q16676 465 aa21.95■■□□□ 1.1
SPPL3-206ENST00000543181 PLPPR3Q6T4P5 718 aa21.02■□□□□ 0.96
SPPL3-206ENST00000543181 MSH5O43196 834 aa20.63■□□□□ 0.89
SPPL3-206ENST00000543181 PIAS4Q8N2W9 510 aaPredicted RBP20.53■□□□□ 0.88
SPPL3-206ENST00000543181 PPP6R1Q9UPN7 881 aa20.49■□□□□ 0.87
SPPL3-206ENST00000543181 ADRA2BP18089 450 aa20.43■□□□□ 0.86
SPPL3-206ENST00000543181 POTEDQ86YR6 584 aa20.05■□□□□ 0.8
SPPL3-206ENST00000543181 SCAF1Q9H7N4 1312 aaKnown RBP18.84■□□□□ 0.61
SPPL3-206ENST00000543181 MAPK8IP2Q13387 824 aaPredicted RBP18.76■□□□□ 0.59
SPPL3-206ENST00000543181 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.59
SPPL3-206ENST00000543181 PPP4R3CPQ6ZMV5 832 aa18.38■□□□□ 0.53
SPPL3-206ENST00000543181 CNKSR2Q8WXI2 1034 aa18.08■□□□□ 0.48
SPPL3-206ENST00000543181 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
SPPL3-206ENST00000543181 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
SPPL3-206ENST00000543181 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
SPPL3-206ENST00000543181 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
SPPL3-206ENST00000543181 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
SPPL3-206ENST00000543181 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
SPPL3-206ENST00000543181 DNAJC5BQ9UF47 199 aa17.49■□□□□ 0.39
SPPL3-206ENST00000543181 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
SPPL3-206ENST00000543181 C1QBPQ07021 282 aaKnown RBP17.35■□□□□ 0.37
SPPL3-206ENST00000543181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
SPPL3-206ENST00000543181 KCNA4P22459 653 aa17.04■□□□□ 0.32
SPPL3-206ENST00000543181 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
SPPL3-206ENST00000543181 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
SPPL3-206ENST00000543181 CAPN15O75808 1086 aa16.53■□□□□ 0.24
SPPL3-206ENST00000543181 SPINK5Q9NQ38 1064 aaPredicted RBP16.51■□□□□ 0.23
SPPL3-206ENST00000543181 APLP2Q06481 763 aa16.45■□□□□ 0.22
SPPL3-206ENST00000543181 DSG3P32926 999 aa16.44■□□□□ 0.22
SPPL3-206ENST00000543181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
SPPL3-206ENST00000543181 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
SPPL3-206ENST00000543181 SAMD1Q6SPF0 538 aaPredicted RBP16.3■□□□□ 0.2
SPPL3-206ENST00000543181 ZNF219Q9P2Y4 722 aaPredicted RBP16.29■□□□□ 0.2
SPPL3-206ENST00000543181 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
SPPL3-206ENST00000543181 MYCNP04198 464 aaPredicted RBP16.14■□□□□ 0.17
SPPL3-206ENST00000543181 SLC4A1APQ9BWU0 796 aaKnown RBP16.14■□□□□ 0.17
SPPL3-206ENST00000543181 ABCB7O75027 752 aa16.1■□□□□ 0.17
SPPL3-206ENST00000543181 FOXD4L1Q9NU39 408 aa15.97■□□□□ 0.15
SPPL3-206ENST00000543181 POLA2Q14181 598 aa15.83■□□□□ 0.12
SPPL3-206ENST00000543181 RBM42Q9BTD8 480 aaKnown RBP15.76■□□□□ 0.11
SPPL3-206ENST00000543181 POTEHQ6S545 545 aa15.74■□□□□ 0.11
SPPL3-206ENST00000543181 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
SPPL3-206ENST00000543181 ZBTB22O15209 634 aa15.63■□□□□ 0.09
SPPL3-206ENST00000543181 ZBTB12Q9Y330 459 aaPredicted RBP15.59■□□□□ 0.09
SPPL3-206ENST00000543181 ATXN8OSP0DMR3 200 aa15.53■□□□□ 0.08
SPPL3-206ENST00000543181 AKT1S1Q96B36 256 aa15.37■□□□□ 0.05
SPPL3-206ENST00000543181 CHRDL2Q6WN34 429 aa15.35■□□□□ 0.05
SPPL3-206ENST00000543181 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
SPPL3-206ENST00000543181 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
SPPL3-206ENST00000543181 FBLN2P98095 1184 aa15.18■□□□□ 0.02
SPPL3-206ENST00000543181 SPDYE2BA6NHP3 402 aa15.08■□□□□ 0
SPPL3-206ENST00000543181 SPDYE6P0CI01 402 aa15.08■□□□□ 0
SPPL3-206ENST00000543181 SPDYE2Q495Y8 402 aa15.08■□□□□ 0
SPPL3-206ENST00000543181 PITPNM1O00562 1244 aa15□□□□□ -0.01
SPPL3-206ENST00000543181 MKRN4PQ13434 485 aaPredicted RBP14.97□□□□□ -0.01
SPPL3-206ENST00000543181 PIP4P2Q8N4L2 257 aa14.96□□□□□ -0.01
SPPL3-206ENST00000543181 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
SPPL3-206ENST00000543181 FXR2P51116 673 aaKnown RBP eCLIP14.9□□□□□ -0.02
SPPL3-206ENST00000543181 ZNF692Q9BU19 519 aaPredicted RBP14.88□□□□□ -0.03
SPPL3-206ENST00000543181 SSUH2Q9Y2M2 353 aa14.84□□□□□ -0.03
SPPL3-206ENST00000543181 SPDYE1Q8NFV5 336 aaPredicted RBP14.82□□□□□ -0.04
SPPL3-206ENST00000543181 SP7Q8TDD2 431 aaPredicted RBP14.77□□□□□ -0.05
SPPL3-206ENST00000543181 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
SPPL3-206ENST00000543181 CLEC11AQ9Y240 323 aa14.74□□□□□ -0.05
SPPL3-206ENST00000543181 HAX1O00165 279 aa14.72□□□□□ -0.05
SPPL3-206ENST00000543181 PABPN1Q86U42 306 aaKnown RBP eCLIP14.64□□□□□ -0.07
SPPL3-206ENST00000543181 PRKAR2AP13861 404 aaKnown RBP14.63□□□□□ -0.07
SPPL3-206ENST00000543181 PRR29P0C7W0 189 aa14.54□□□□□ -0.08
SPPL3-206ENST00000543181 EVX2Q03828 476 aa14.46□□□□□ -0.09
SPPL3-206ENST00000543181 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
SPPL3-206ENST00000543181 C19orf67A6NJJ6 358 aa14.42□□□□□ -0.1
SPPL3-206ENST00000543181 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
SPPL3-206ENST00000543181 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
SPPL3-206ENST00000543181 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.13
SPPL3-206ENST00000543181 GABBR2O75899 941 aa14.2□□□□□ -0.14
SPPL3-206ENST00000543181 CD44P16070 742 aaKnown RBP14.17□□□□□ -0.14
SPPL3-206ENST00000543181 CREBZFQ9NS37 354 aa14.13□□□□□ -0.15
SPPL3-206ENST00000543181 CLCN6P51797 869 aa14.1□□□□□ -0.15
SPPL3-206ENST00000543181 PROM2Q8N271 834 aa13.97□□□□□ -0.17
SPPL3-206ENST00000543181 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
SPPL3-206ENST00000543181 ZRANB1Q9UGI0 708 aa13.97□□□□□ -0.17
SPPL3-206ENST00000543181 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
SPPL3-206ENST00000543181 PAK3O75914 559 aaPredicted RBP13.92□□□□□ -0.18
SPPL3-206ENST00000543181 MNX1P50219 401 aaPredicted RBP13.87□□□□□ -0.19
SPPL3-206ENST00000543181 POTEIP0CG38 1075 aa13.85□□□□□ -0.19
SPPL3-206ENST00000543181 LHX8Q68G74 356 aa13.85□□□□□ -0.19
SPPL3-206ENST00000543181 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
SPPL3-206ENST00000543181 GALR2O43603 387 aaPredicted RBP13.75□□□□□ -0.21
SPPL3-206ENST00000543181 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
SPPL3-206ENST00000543181 PHF12Q96QT6 1004 aa13.73□□□□□ -0.21
SPPL3-206ENST00000543181 MIER1Q8N108 512 aa13.68□□□□□ -0.22
SPPL3-206ENST00000543181 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
SPPL3-206ENST00000543181 FKBP8Q14318 412 aa13.58□□□□□ -0.24
SPPL3-206ENST00000543181 PLCD3Q8N3E9 789 aa13.57□□□□□ -0.24
SPPL3-206ENST00000543181 MS4A3Q96HJ5 214 aa13.57□□□□□ -0.24
SPPL3-206ENST00000543181 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms