RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 NISCHQ9Y2I1 1504 aa20.4■□□□□ 0.86
DDX42-204ENST00000577940 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
DDX42-204ENST00000577940 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
DDX42-204ENST00000577940 ABCC9O60706 1549 aa18.16■□□□□ 0.5
DDX42-204ENST00000577940 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
DDX42-204ENST00000577940 DCAF8L2P0C7V8 631 aa17.35■□□□□ 0.37
DDX42-204ENST00000577940 RB1CC1Q8TDY2 1594 aa17.31■□□□□ 0.36
DDX42-204ENST00000577940 NACADO15069 1562 aa17.25■□□□□ 0.35
DDX42-204ENST00000577940 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
DDX42-204ENST00000577940 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
DDX42-204ENST00000577940 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.31
DDX42-204ENST00000577940 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
DDX42-204ENST00000577940 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
DDX42-204ENST00000577940 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
DDX42-204ENST00000577940 PHF23Q9BUL5 403 aaPredicted RBP16.81■□□□□ 0.28
DDX42-204ENST00000577940 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
DDX42-204ENST00000577940 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
DDX42-204ENST00000577940 SHROOM4Q9ULL8 1493 aa16.64■□□□□ 0.25
DDX42-204ENST00000577940 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
DDX42-204ENST00000577940 CECR2Q9BXF3 1484 aa16.39■□□□□ 0.21
DDX42-204ENST00000577940 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
DDX42-204ENST00000577940 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
DDX42-204ENST00000577940 FOXD1Q16676 465 aa16.02■□□□□ 0.16
DDX42-204ENST00000577940 NCAPD3P42695 1498 aa15.98■□□□□ 0.15
DDX42-204ENST00000577940 ATAD2BQ9ULI0 1458 aa15.91■□□□□ 0.14
DDX42-204ENST00000577940 SMARCA2P51531 1590 aa15.86■□□□□ 0.13
DDX42-204ENST00000577940 POTEDQ86YR6 584 aa15.85■□□□□ 0.13
DDX42-204ENST00000577940 BAZ1AQ9NRL2 1556 aaPredicted RBP15.83■□□□□ 0.12
DDX42-204ENST00000577940 SMARCA4P51532 1647 aa15.82■□□□□ 0.12
DDX42-204ENST00000577940 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
DDX42-204ENST00000577940 BAZ1BQ9UIG0 1483 aaKnown RBP15.75■□□□□ 0.11
DDX42-204ENST00000577940 ERCC6Q03468 1493 aa15.73■□□□□ 0.11
DDX42-204ENST00000577940 MROH2BQ7Z745 1585 aa15.69■□□□□ 0.1
DDX42-204ENST00000577940 PEG3Q9GZU2 1588 aa15.69■□□□□ 0.1
DDX42-204ENST00000577940 CUX2O14529 1486 aa15.65■□□□□ 0.1
DDX42-204ENST00000577940 DNAJC5Q9H3Z4 198 aa15.61■□□□□ 0.09
DDX42-204ENST00000577940 NESP48681 1621 aa15.59■□□□□ 0.09
DDX42-204ENST00000577940 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
DDX42-204ENST00000577940 CADPSQ9ULU8 1353 aa15.53■□□□□ 0.08
DDX42-204ENST00000577940 LAMC3Q9Y6N6 1575 aa15.51■□□□□ 0.07
DDX42-204ENST00000577940 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
DDX42-204ENST00000577940 WIZO95785 1651 aa15.42■□□□□ 0.06
DDX42-204ENST00000577940 THOC2Q8NI27 1593 aaKnown RBP15.33■□□□□ 0.05
DDX42-204ENST00000577940 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.04
DDX42-204ENST00000577940 CFTRP13569 1480 aa15.32■□□□□ 0.04
DDX42-204ENST00000577940 TOP2AP11388 1531 aaKnown RBP15.32■□□□□ 0.04
DDX42-204ENST00000577940 FANCD2Q9BXW9 1451 aa15.29■□□□□ 0.04
DDX42-204ENST00000577940 CEP164Q9UPV0 1460 aa15.29■□□□□ 0.04
DDX42-204ENST00000577940 KIF21AQ7Z4S6 1674 aa15.26■□□□□ 0.03
DDX42-204ENST00000577940 MSH5O43196 834 aa15.26■□□□□ 0.03
DDX42-204ENST00000577940 WDR62O43379 1518 aa15.24■□□□□ 0.03
DDX42-204ENST00000577940 CCDC88BA6NC98 1476 aa15.2■□□□□ 0.02
DDX42-204ENST00000577940 URB2Q14146 1524 aaKnown RBP15.1■□□□□ 0.01
DDX42-204ENST00000577940 OSCARQ8IYS5 282 aa15.08■□□□□ 0
DDX42-204ENST00000577940 ABCC8Q09428 1581 aa15.04■□□□□ -0
DDX42-204ENST00000577940 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
DDX42-204ENST00000577940 TOPBP1Q92547 1522 aa14.98□□□□□ -0.01
DDX42-204ENST00000577940 TRIM41Q8WV44 630 aa14.96□□□□□ -0.01
DDX42-204ENST00000577940 SUPT5HO00267 1087 aaKnown RBP14.95□□□□□ -0.02
DDX42-204ENST00000577940 ZNF608Q9ULD9 1512 aaPredicted RBP14.91□□□□□ -0.02
DDX42-204ENST00000577940 DNMBPQ6XZF7 1577 aa14.91□□□□□ -0.02
DDX42-204ENST00000577940 PRDM2Q13029 1718 aa14.89□□□□□ -0.03
DDX42-204ENST00000577940 PIAS4Q8N2W9 510 aaPredicted RBP14.85□□□□□ -0.03
DDX42-204ENST00000577940 SOGA1O94964 1423 aa14.85□□□□□ -0.03
DDX42-204ENST00000577940 AQRO60306 1485 aaKnown RBP eCLIP14.84□□□□□ -0.034e-7■■■■■ 27.8
DDX42-204ENST00000577940 POLA1P09884 1462 aaPredicted RBP14.84□□□□□ -0.03
DDX42-204ENST00000577940 FBLN2P98095 1184 aa14.83□□□□□ -0.04
DDX42-204ENST00000577940 TDRD9Q8NDG6 1382 aaKnown RBP14.8□□□□□ -0.04
DDX42-204ENST00000577940 RAD54L2Q9Y4B4 1467 aa14.79□□□□□ -0.04
DDX42-204ENST00000577940 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
DDX42-204ENST00000577940 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
DDX42-204ENST00000577940 EIF4G3O43432 1585 aaKnown RBP14.75□□□□□ -0.05
DDX42-204ENST00000577940 CHMP7Q8WUX9 453 aaPredicted RBP14.75□□□□□ -0.05
DDX42-204ENST00000577940 CUX1P39880 1505 aa14.73□□□□□ -0.05
DDX42-204ENST00000577940 CYB5RLQ6IPT4 315 aa14.69□□□□□ -0.06
DDX42-204ENST00000577940 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
DDX42-204ENST00000577940 WDR97A6NE52 1622 aa14.67□□□□□ -0.06
DDX42-204ENST00000577940 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
DDX42-204ENST00000577940 SNAPC4Q5SXM2 1469 aa14.66□□□□□ -0.06
DDX42-204ENST00000577940 MAGI1Q96QZ7 1491 aaPredicted RBP14.66□□□□□ -0.06
DDX42-204ENST00000577940 WRNQ14191 1432 aaPredicted RBP eCLIP14.65□□□□□ -0.06
DDX42-204ENST00000577940 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
DDX42-204ENST00000577940 RIMBP3CA6NJZ7 1639 aa14.62□□□□□ -0.07
DDX42-204ENST00000577940 RIMBP3BA6NNM3 1639 aa14.62□□□□□ -0.07
DDX42-204ENST00000577940 RIMBP3Q9UFD9 1639 aa14.62□□□□□ -0.07
DDX42-204ENST00000577940 ABCA10Q8WWZ4 1543 aa14.62□□□□□ -0.07
DDX42-204ENST00000577940 SYNJ2O15056 1496 aa14.61□□□□□ -0.07
DDX42-204ENST00000577940 SYNJ1O43426 1573 aa14.54□□□□□ -0.08
DDX42-204ENST00000577940 CHD1O14646 1710 aa14.54□□□□□ -0.08
DDX42-204ENST00000577940 ARAP1Q96P48 1450 aa14.52□□□□□ -0.09
DDX42-204ENST00000577940 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
DDX42-204ENST00000577940 PPP6R1Q9UPN7 881 aa14.51□□□□□ -0.09
DDX42-204ENST00000577940 TOP2BQ02880 1626 aa14.5□□□□□ -0.09
DDX42-204ENST00000577940 CLASP1Q7Z460 1538 aa14.5□□□□□ -0.09
DDX42-204ENST00000577940 FHAD1B1AJZ9 1412 aa14.48□□□□□ -0.09
DDX42-204ENST00000577940 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
DDX42-204ENST00000577940 PLPPR3Q6T4P5 718 aa14.46□□□□□ -0.09
DDX42-204ENST00000577940 GRIN2AQ12879 1464 aa14.46□□□□□ -0.1
DDX42-204ENST00000577940 ADRA2BP18089 450 aa14.44□□□□□ -0.1
DDX42-204ENST00000577940 BIVM-ERCC5R4GMW8 1640 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms