RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 AEBP2Q6ZN18 517 aaPredicted RBP27.68■■■□□ 2.02
DENND4A-204ENST00000562028 CHIC1Q5VXU3 224 aa27.34■■□□□ 1.97
DENND4A-204ENST00000562028 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
DENND4A-204ENST00000562028 SENP3Q9H4L4 574 aaPredicted RBP23.49■■□□□ 1.35
DENND4A-204ENST00000562028 PLPPR3Q6T4P5 718 aa22.33■■□□□ 1.17
DENND4A-204ENST00000562028 FOXD1Q16676 465 aa21.74■■□□□ 1.07
DENND4A-204ENST00000562028 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
DENND4A-204ENST00000562028 ADRA2BP18089 450 aa21.11■□□□□ 0.97
DENND4A-204ENST00000562028 PIAS4Q8N2W9 510 aaPredicted RBP20.56■□□□□ 0.88
DENND4A-204ENST00000562028 MSH5O43196 834 aa19.97■□□□□ 0.79
DENND4A-204ENST00000562028 PPP4R3CPQ6ZMV5 832 aa19.69■□□□□ 0.74
DENND4A-204ENST00000562028 KCNA4P22459 653 aa19.53■□□□□ 0.72
DENND4A-204ENST00000562028 SCAF1Q9H7N4 1312 aaKnown RBP19.38■□□□□ 0.69
DENND4A-204ENST00000562028 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
DENND4A-204ENST00000562028 CNKSR2Q8WXI2 1034 aa19.1■□□□□ 0.65
DENND4A-204ENST00000562028 MAPK8IP2Q13387 824 aaPredicted RBP19.06■□□□□ 0.64
DENND4A-204ENST00000562028 NPM3O75607 178 aaKnown RBP18.97■□□□□ 0.63
DENND4A-204ENST00000562028 DMRT2Q9Y5R5 561 aa18.79■□□□□ 0.6
DENND4A-204ENST00000562028 RNF216Q9NWF9 866 aaPredicted RBP18.66■□□□□ 0.58
DENND4A-204ENST00000562028 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
DENND4A-204ENST00000562028 HOXD11P31277 338 aaPredicted RBP18.52■□□□□ 0.56
DENND4A-204ENST00000562028 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
DENND4A-204ENST00000562028 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
DENND4A-204ENST00000562028 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
DENND4A-204ENST00000562028 ZBTB22O15209 634 aa17.96■□□□□ 0.47
DENND4A-204ENST00000562028 FOXD4L1Q9NU39 408 aa17.92■□□□□ 0.46
DENND4A-204ENST00000562028 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
DENND4A-204ENST00000562028 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
DENND4A-204ENST00000562028 POTEDQ86YR6 584 aa17.67■□□□□ 0.42
DENND4A-204ENST00000562028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.62■□□□□ 0.41
DENND4A-204ENST00000562028 MYCNP04198 464 aaPredicted RBP17.54■□□□□ 0.4
DENND4A-204ENST00000562028 U3KPZ7 1027 aaPredicted RBP17.36■□□□□ 0.37
DENND4A-204ENST00000562028 ATXN8OSP0DMR3 200 aa17.32■□□□□ 0.36
DENND4A-204ENST00000562028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
DENND4A-204ENST00000562028 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
DENND4A-204ENST00000562028 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
DENND4A-204ENST00000562028 RNF39Q9H2S5 420 aa17.13■□□□□ 0.33
DENND4A-204ENST00000562028 APLP2Q06481 763 aa17.05■□□□□ 0.32
DENND4A-204ENST00000562028 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
DENND4A-204ENST00000562028 C1QBPQ07021 282 aaKnown RBP16.96■□□□□ 0.31
DENND4A-204ENST00000562028 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
DENND4A-204ENST00000562028 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
DENND4A-204ENST00000562028 CAPN15O75808 1086 aa16.7■□□□□ 0.26
DENND4A-204ENST00000562028 TRHP20396 242 aaPredicted RBP16.68■□□□□ 0.26
DENND4A-204ENST00000562028 POLA2Q14181 598 aa16.5■□□□□ 0.23
DENND4A-204ENST00000562028 CACNB1Q02641 598 aaPredicted RBP16.46■□□□□ 0.23
DENND4A-204ENST00000562028 ABCB7O75027 752 aa16.39■□□□□ 0.21
DENND4A-204ENST00000562028 DSG3P32926 999 aa16.38■□□□□ 0.21
DENND4A-204ENST00000562028 FKBP8Q14318 412 aa16.33■□□□□ 0.2
DENND4A-204ENST00000562028 FBLN2P98095 1184 aa16.32■□□□□ 0.2
DENND4A-204ENST00000562028 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
DENND4A-204ENST00000562028 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
DENND4A-204ENST00000562028 SPDYE4A6NLX3 237 aa16.08■□□□□ 0.16
DENND4A-204ENST00000562028 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
DENND4A-204ENST00000562028 PROM2Q8N271 834 aa15.88■□□□□ 0.13
DENND4A-204ENST00000562028 SPDYE2BA6NHP3 402 aa15.86■□□□□ 0.13
DENND4A-204ENST00000562028 SPDYE6P0CI01 402 aa15.86■□□□□ 0.13
DENND4A-204ENST00000562028 SPDYE2Q495Y8 402 aa15.86■□□□□ 0.13
DENND4A-204ENST00000562028 ZNF692Q9BU19 519 aaPredicted RBP15.82■□□□□ 0.12
DENND4A-204ENST00000562028 SSUH2Q9Y2M2 353 aa15.76■□□□□ 0.11
DENND4A-204ENST00000562028 FBXO3Q9UK99 471 aa15.74■□□□□ 0.11
DENND4A-204ENST00000562028 RBM42Q9BTD8 480 aaKnown RBP15.63■□□□□ 0.09
DENND4A-204ENST00000562028 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
DENND4A-204ENST00000562028 AKT1S1Q96B36 256 aa15.5■□□□□ 0.07
DENND4A-204ENST00000562028 VASPP50552 380 aaPredicted RBP15.48■□□□□ 0.07
DENND4A-204ENST00000562028 STAG3Q9UJ98 1225 aa15.46■□□□□ 0.07
DENND4A-204ENST00000562028 AMER1Q5JTC6 1135 aaPredicted RBP15.4■□□□□ 0.06
DENND4A-204ENST00000562028 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
DENND4A-204ENST00000562028 SPDYE1Q8NFV5 336 aaPredicted RBP15.32■□□□□ 0.04
DENND4A-204ENST00000562028 RTN4Q9NQC3 1192 aaKnown RBP15.31■□□□□ 0.04
DENND4A-204ENST00000562028 IFNLR1Q8IU57 520 aaPredicted RBP15.28■□□□□ 0.04
DENND4A-204ENST00000562028 PLCD3Q8N3E9 789 aa15.22■□□□□ 0.03
DENND4A-204ENST00000562028 MIER1Q8N108 512 aa15.21■□□□□ 0.03
DENND4A-204ENST00000562028 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
DENND4A-204ENST00000562028 PLEKHG5O94827 1062 aa15.15■□□□□ 0.02
DENND4A-204ENST00000562028 KLHL34Q8N239 644 aa15.14■□□□□ 0.01
DENND4A-204ENST00000562028 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
DENND4A-204ENST00000562028 PRR29P0C7W0 189 aa15.13■□□□□ 0.01
DENND4A-204ENST00000562028 ZBTB47Q9UFB7 747 aaPredicted RBP15.08■□□□□ 0
DENND4A-204ENST00000562028 SPOCK2Q92563 424 aa15.07■□□□□ 0
DENND4A-204ENST00000562028 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
DENND4A-204ENST00000562028 MNX1P50219 401 aaPredicted RBP14.88□□□□□ -0.03
DENND4A-204ENST00000562028 PKD2Q13563 968 aa14.87□□□□□ -0.03
DENND4A-204ENST00000562028 CHRDL2Q6WN34 429 aa14.84□□□□□ -0.03
DENND4A-204ENST00000562028 FXR2P51116 673 aaKnown RBP eCLIP14.82□□□□□ -0.04
DENND4A-204ENST00000562028 NUBP1P53384 320 aa14.81□□□□□ -0.04
DENND4A-204ENST00000562028 NPM1P06748 294 aaKnown RBP eCLIP14.79□□□□□ -0.04
DENND4A-204ENST00000562028 CHADLQ6NUI6 762 aa14.79□□□□□ -0.04
DENND4A-204ENST00000562028 PRKAR2AP13861 404 aaKnown RBP14.76□□□□□ -0.05
DENND4A-204ENST00000562028 CIZ1Q9ULV3 898 aaPredicted RBP14.76□□□□□ -0.05
DENND4A-204ENST00000562028 GSE1Q14687 1217 aa14.74□□□□□ -0.05
DENND4A-204ENST00000562028 ECM2O94769 699 aaPredicted RBP14.73□□□□□ -0.05
DENND4A-204ENST00000562028 PIP4P2Q8N4L2 257 aa14.71□□□□□ -0.05
DENND4A-204ENST00000562028 FARP1Q9Y4F1 1045 aaPredicted RBP14.71□□□□□ -0.05
DENND4A-204ENST00000562028 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
DENND4A-204ENST00000562028 FAM212AQ96EL1 285 aa14.68□□□□□ -0.06
DENND4A-204ENST00000562028 DCAF8Q5TAQ9 597 aa14.67□□□□□ -0.06
DENND4A-204ENST00000562028 RASEFQ8IZ41 740 aa14.66□□□□□ -0.06
DENND4A-204ENST00000562028 DCAF8L2P0C7V8 631 aa14.58□□□□□ -0.08
DENND4A-204ENST00000562028 RGL2O15211 777 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms