Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NDUFS3O75489 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
NDUFS3O75489 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.38□□□□□ -0.11
NDUFS3O75489 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NDUFS3O75489 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NDUFS3O75489 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFS3O75489 LAP3P2-201ENST00000454686 1454 ntBASIC14.38□□□□□ -0.11
NDUFS3O75489 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NDUFS3O75489 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.37□□□□□ -0.11
NDUFS3O75489 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NDUFS3O75489 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NDUFS3O75489 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.37□□□□□ -0.11
NDUFS3O75489 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFS3O75489 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 AC144522.1-201ENST00000625111 1658 ntBASIC14.37□□□□□ -0.11
NDUFS3O75489 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFS3O75489 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFS3O75489 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
NDUFS3O75489 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 OR8S1-201ENST00000310194 1080 ntBASIC14.37□□□□□ -0.11
NDUFS3O75489 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NDUFS3O75489 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFS3O75489 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.37□□□□□ -0.11
NDUFS3O75489 ATP5G2P4-201ENST00000442175 420 ntBASIC14.37□□□□□ -0.11
NDUFS3O75489 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFS3O75489 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFS3O75489 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.37□□□□□ -0.11
NDUFS3O75489 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NDUFS3O75489 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFS3O75489 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.37□□□□□ -0.11
NDUFS3O75489 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 AC124068.2-201ENST00000569473 1109 ntBASIC14.37□□□□□ -0.11
NDUFS3O75489 RN7SL560P-201ENST00000577943 264 ntBASIC14.37□□□□□ -0.11
NDUFS3O75489 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.37□□□□□ -0.11
NDUFS3O75489 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.37□□□□□ -0.11
NDUFS3O75489 AL157996.1-201ENST00000624684 2299 ntBASIC14.37□□□□□ -0.11
NDUFS3O75489 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NDUFS3O75489 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFS3O75489 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NDUFS3O75489 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFS3O75489 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.37□□□□□ -0.11
NDUFS3O75489 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFS3O75489 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NDUFS3O75489 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFS3O75489 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFS3O75489 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFS3O75489 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFS3O75489 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFS3O75489 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.36□□□□□ -0.11
NDUFS3O75489 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFS3O75489 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 BTBD6P1-201ENST00000412176 1267 ntBASIC14.36□□□□□ -0.11
NDUFS3O75489 HSPB1P2-201ENST00000448722 546 ntBASIC14.36□□□□□ -0.11
NDUFS3O75489 BNIP3P42-201ENST00000454982 569 ntBASIC14.36□□□□□ -0.11
NDUFS3O75489 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.36□□□□□ -0.11
NDUFS3O75489 TUBB8P8-201ENST00000458717 1058 ntBASIC14.36□□□□□ -0.11
NDUFS3O75489 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NDUFS3O75489 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.36□□□□□ -0.11
NDUFS3O75489 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFS3O75489 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.36□□□□□ -0.11
NDUFS3O75489 BNIP3P29-201ENST00000598302 571 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms