Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 MSNP1-201ENST00000511640 1732 ntBASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 PDIA3P1-201ENST00000471856 1510 ntBASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 AC010336.1-201ENST00000539278 4739 ntBASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TPRKBQ9Y3C4 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 HLA-V-204ENST00000476601 1289 ntBASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 AC005586.2-201ENST00000563946 837 ntBASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 PCDHB19P-202ENST00000625133 2914 ntBASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
TPRKBQ9Y3C4 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms