RNA–Protein interactions for RNA: ENST00000625133.1

PCDHB19P-202, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,914 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-202ENST00000625133 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.43
PCDHB19P-202ENST00000625133 CCDC180Q9P1Z9 1646 aa26.03■■□□□ 1.76
PCDHB19P-202ENST00000625133 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
PCDHB19P-202ENST00000625133 ZCCHC6Q5VYS8 1495 aaKnown RBP25.33■■□□□ 1.65
PCDHB19P-202ENST00000625133 SHROOM4Q9ULL8 1493 aa25.11■■□□□ 1.61
PCDHB19P-202ENST00000625133 ABCC9O60706 1549 aa25.09■■□□□ 1.61
PCDHB19P-202ENST00000625133 DCAF1Q9Y4B6 1507 aa24.73■■□□□ 1.55
PCDHB19P-202ENST00000625133 MYO15BQ96JP2 1530 aa24.38■■□□□ 1.49
PCDHB19P-202ENST00000625133 NACADO15069 1562 aa24.34■■□□□ 1.49
PCDHB19P-202ENST00000625133 SCRIBQ14160 1630 aa24.32■■□□□ 1.48
PCDHB19P-202ENST00000625133 SUPT5HO00267 1087 aaKnown RBP24.24■■□□□ 1.47
PCDHB19P-202ENST00000625133 RB1CC1Q8TDY2 1594 aa24.15■■□□□ 1.46
PCDHB19P-202ENST00000625133 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
PCDHB19P-202ENST00000625133 UNC13AQ9UPW8 1703 aa23.77■■□□□ 1.4
PCDHB19P-202ENST00000625133 CECR2Q9BXF3 1484 aa23.7■■□□□ 1.38
PCDHB19P-202ENST00000625133 BICRAQ9NZM4 1560 aa23.6■■□□□ 1.37
PCDHB19P-202ENST00000625133 RSF1Q96T23 1441 aaPredicted RBP23.56■■□□□ 1.36
PCDHB19P-202ENST00000625133 MROH2BQ7Z745 1585 aa23.47■■□□□ 1.35
PCDHB19P-202ENST00000625133 WIZO95785 1651 aa23.26■■□□□ 1.31
PCDHB19P-202ENST00000625133 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
PCDHB19P-202ENST00000625133 SMARCA4P51532 1647 aa23.17■■□□□ 1.3
PCDHB19P-202ENST00000625133 CHIC1Q5VXU3 224 aa23.02■■□□□ 1.27
PCDHB19P-202ENST00000625133 ATAD2BQ9ULI0 1458 aa22.87■■□□□ 1.25
PCDHB19P-202ENST00000625133 EIF4G1Q04637 1599 aaKnown RBP22.85■■□□□ 1.25
PCDHB19P-202ENST00000625133 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
PCDHB19P-202ENST00000625133 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
PCDHB19P-202ENST00000625133 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
PCDHB19P-202ENST00000625133 SMARCA2P51531 1590 aa22.71■■□□□ 1.23
PCDHB19P-202ENST00000625133 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
PCDHB19P-202ENST00000625133 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
PCDHB19P-202ENST00000625133 CC2D2AQ9P2K1 1620 aa22.55■■□□□ 1.2
PCDHB19P-202ENST00000625133 TRIM41Q8WV44 630 aa22.54■■□□□ 1.2
PCDHB19P-202ENST00000625133 DNAJC5BQ9UF47 199 aa22.5■■□□□ 1.19
PCDHB19P-202ENST00000625133 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
PCDHB19P-202ENST00000625133 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
PCDHB19P-202ENST00000625133 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
PCDHB19P-202ENST00000625133 HMGXB3Q12766 1538 aa22.43■■□□□ 1.18
PCDHB19P-202ENST00000625133 PCGF6Q9BYE7 350 aa22.41■■□□□ 1.18
PCDHB19P-202ENST00000625133 ABCC8Q09428 1581 aa22.4■■□□□ 1.18
PCDHB19P-202ENST00000625133 HRCP23327 699 aa22.37■■□□□ 1.17
PCDHB19P-202ENST00000625133 CFTRP13569 1480 aa22.13■■□□□ 1.13
PCDHB19P-202ENST00000625133 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
PCDHB19P-202ENST00000625133 CADPSQ9ULU8 1353 aa22.1■■□□□ 1.13
PCDHB19P-202ENST00000625133 NESP48681 1621 aa22.08■■□□□ 1.13
PCDHB19P-202ENST00000625133 SYNJ1O43426 1573 aa22.05■■□□□ 1.12
PCDHB19P-202ENST00000625133 PPARGC1BQ86YN6 1023 aaKnown RBP22.04■■□□□ 1.12
PCDHB19P-202ENST00000625133 SOGA1O94964 1423 aa22.04■■□□□ 1.12
PCDHB19P-202ENST00000625133 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
PCDHB19P-202ENST00000625133 CUX1P39880 1505 aa21.9■■□□□ 1.1
PCDHB19P-202ENST00000625133 TRIM26Q12899 539 aaPredicted RBP21.87■■□□□ 1.09
PCDHB19P-202ENST00000625133 FANCD2Q9BXW9 1451 aa21.85■■□□□ 1.09
PCDHB19P-202ENST00000625133 TOP2BQ02880 1626 aa21.82■■□□□ 1.08
PCDHB19P-202ENST00000625133 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
PCDHB19P-202ENST00000625133 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
PCDHB19P-202ENST00000625133 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
PCDHB19P-202ENST00000625133 LAMC3Q9Y6N6 1575 aa21.71■■□□□ 1.07
PCDHB19P-202ENST00000625133 FGD5Q6ZNL6 1462 aa21.64■■□□□ 1.06
PCDHB19P-202ENST00000625133 UBTFP17480 764 aaKnown RBP21.64■■□□□ 1.06
PCDHB19P-202ENST00000625133 PDS5BQ9NTI5 1447 aa21.64■■□□□ 1.05
PCDHB19P-202ENST00000625133 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.05
PCDHB19P-202ENST00000625133 URB2Q14146 1524 aaKnown RBP21.62■■□□□ 1.05
PCDHB19P-202ENST00000625133 RANGAP1P46060 587 aaPredicted RBP21.61■■□□□ 1.05
PCDHB19P-202ENST00000625133 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
PCDHB19P-202ENST00000625133 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
PCDHB19P-202ENST00000625133 EEA1Q15075 1411 aa21.6■■□□□ 1.05
PCDHB19P-202ENST00000625133 KIF21AQ7Z4S6 1674 aa21.59■■□□□ 1.05
PCDHB19P-202ENST00000625133 CUX2O14529 1486 aa21.54■■□□□ 1.04
PCDHB19P-202ENST00000625133 POLA1P09884 1462 aaPredicted RBP21.53■■□□□ 1.04
PCDHB19P-202ENST00000625133 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
PCDHB19P-202ENST00000625133 RAPGEF2Q9Y4G8 1499 aa21.51■■□□□ 1.03
PCDHB19P-202ENST00000625133 KIF27Q86VH2 1401 aa21.5■■□□□ 1.03
PCDHB19P-202ENST00000625133 TTBK1Q5TCY1 1321 aaPredicted RBP21.48■■□□□ 1.03
PCDHB19P-202ENST00000625133 IGF1RP08069 1367 aa21.46■■□□□ 1.03
PCDHB19P-202ENST00000625133 GOLGA3Q08378 1498 aa21.44■■□□□ 1.02
PCDHB19P-202ENST00000625133 TDRD9Q8NDG6 1382 aaKnown RBP21.43■■□□□ 1.02
PCDHB19P-202ENST00000625133 TNIKQ9UKE5 1360 aa21.43■■□□□ 1.02
PCDHB19P-202ENST00000625133 PRXQ9BXM0 1461 aa21.39■■□□□ 1.01
PCDHB19P-202ENST00000625133 CEP162Q5TB80 1403 aa21.39■■□□□ 1.01
PCDHB19P-202ENST00000625133 ERCC6Q03468 1493 aa21.38■■□□□ 1.01
PCDHB19P-202ENST00000625133 MRC2Q9UBG0 1479 aa21.36■■□□□ 1.01
PCDHB19P-202ENST00000625133 KIF21BO75037 1637 aa21.36■■□□□ 1.01
PCDHB19P-202ENST00000625133 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
PCDHB19P-202ENST00000625133 ABCA10Q8WWZ4 1543 aa21.35■■□□□ 1.01
PCDHB19P-202ENST00000625133 CARMIL1Q5VZK9 1371 aa21.31■■□□□ 1
PCDHB19P-202ENST00000625133 AQRO60306 1485 aaKnown RBP eCLIP21.27■□□□□ 0.99
PCDHB19P-202ENST00000625133 TARBP1Q13395 1621 aaKnown RBP21.23■□□□□ 0.99
PCDHB19P-202ENST00000625133 ZNF608Q9ULD9 1512 aaPredicted RBP21.22■□□□□ 0.99
PCDHB19P-202ENST00000625133 WDR62O43379 1518 aa21.21■□□□□ 0.99
PCDHB19P-202ENST00000625133 GAPVD1Q14C86 1478 aa21.21■□□□□ 0.99
PCDHB19P-202ENST00000625133 CLIP1P30622 1438 aa21.2■□□□□ 0.98
PCDHB19P-202ENST00000625133 PELP1Q8IZL8 1130 aaKnown RBP21.2■□□□□ 0.98
PCDHB19P-202ENST00000625133 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
PCDHB19P-202ENST00000625133 WDR97A6NE52 1622 aa21.19■□□□□ 0.98
PCDHB19P-202ENST00000625133 THOC2Q8NI27 1593 aaKnown RBP21.17■□□□□ 0.98
PCDHB19P-202ENST00000625133 ABCA5Q8WWZ7 1642 aa21.14■□□□□ 0.97
PCDHB19P-202ENST00000625133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.09■□□□□ 0.97
PCDHB19P-202ENST00000625133 P3H3Q8IVL6 736 aa21.09■□□□□ 0.97
PCDHB19P-202ENST00000625133 IFT140Q96RY7 1462 aa21.08■□□□□ 0.96
PCDHB19P-202ENST00000625133 ARAP1Q96P48 1450 aa21.02■□□□□ 0.96
PCDHB19P-202ENST00000625133 ARHGAP35Q9NRY4 1499 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms