Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC34P49427 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC34P49427 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC34P49427 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.45□□□□□ -0.58
CDC34P49427 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CDC34P49427 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.45□□□□□ -0.58
CDC34P49427 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC34P49427 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.45□□□□□ -0.58
CDC34P49427 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.45□□□□□ -0.58
CDC34P49427 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.45□□□□□ -0.58
CDC34P49427 HLA-V-204ENST00000476601 1289 ntBASIC11.45□□□□□ -0.58
CDC34P49427 ALG1L5P-201ENST00000482043 771 ntBASIC11.45□□□□□ -0.58
CDC34P49427 AC093520.2-201ENST00000561830 333 ntBASIC11.45□□□□□ -0.58
CDC34P49427 TEX28P1-201ENST00000613479 1221 ntBASIC11.45□□□□□ -0.58
CDC34P49427 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC11.45□□□□□ -0.58
CDC34P49427 TEX28P2-201ENST00000617764 1221 ntBASIC11.45□□□□□ -0.58
CDC34P49427 BX539320.1-201ENST00000623759 877 ntBASIC11.45□□□□□ -0.58
CDC34P49427 AL513210.1-201ENST00000629608 234 ntBASIC11.45□□□□□ -0.58
CDC34P49427 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 MARK2P9-201ENST00000430958 1727 ntBASIC11.45□□□□□ -0.58
CDC34P49427 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC34P49427 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC34P49427 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC34P49427 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
CDC34P49427 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CDC34P49427 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
CDC34P49427 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC34P49427 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CDC34P49427 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CDC34P49427 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CDC34P49427 AC139712.1-201ENST00000378256 1875 ntBASIC11.44□□□□□ -0.58
CDC34P49427 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
CDC34P49427 AC010336.1-201ENST00000539278 4739 ntBASIC11.44□□□□□ -0.58
CDC34P49427 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC34P49427 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
CDC34P49427 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.44□□□□□ -0.58
CDC34P49427 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC34P49427 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CDC34P49427 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CDC34P49427 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC11.44□□□□□ -0.58
CDC34P49427 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.44□□□□□ -0.58
CDC34P49427 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.44□□□□□ -0.58
CDC34P49427 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.44□□□□□ -0.58
CDC34P49427 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC34P49427 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CDC34P49427 USP17L6P-201ENST00000382470 1197 ntBASIC11.44□□□□□ -0.58
CDC34P49427 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CDC34P49427 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
CDC34P49427 AL590627.1-203ENST00000421194 1026 ntBASIC11.44□□□□□ -0.58
CDC34P49427 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC34P49427 AC026410.3-201ENST00000514280 936 ntBASIC11.44□□□□□ -0.58
CDC34P49427 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CDC34P49427 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC11.44□□□□□ -0.58
CDC34P49427 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.44□□□□□ -0.58
CDC34P49427 AC103988.2-201ENST00000561804 725 ntBASIC11.44□□□□□ -0.58
CDC34P49427 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.44□□□□□ -0.58
CDC34P49427 AL596442.2-201ENST00000610240 980 ntBASIC11.44□□□□□ -0.58
CDC34P49427 BAP1-211ENST00000615113 489 ntBASIC11.44□□□□□ -0.58
CDC34P49427 PRSS30P-206ENST00000641773 873 ntBASIC11.44□□□□□ -0.58
CDC34P49427 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC34P49427 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 AP001972.5-201ENST00000624624 2338 ntBASIC11.44□□□□□ -0.58
CDC34P49427 LINC02486-201ENST00000604157 3000 ntBASIC11.44□□□□□ -0.58
CDC34P49427 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC34P49427 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CDC34P49427 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CDC34P49427 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC34P49427 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms