RNA–Protein interactions for RNA: ENST00000562903.5

KIFC3-211, Transcript of kinesin family member C3, humanhuman

TSL 1 (best) BASIC

Gene KIFC3, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-211ENST00000562903 NISCHQ9Y2I1 1504 aa26.31■■□□□ 1.8
KIFC3-211ENST00000562903 SHROOM4Q9ULL8 1493 aa23.7■■□□□ 1.38
KIFC3-211ENST00000562903 SUPT5HO00267 1087 aaKnown RBP23.34■■□□□ 1.33
KIFC3-211ENST00000562903 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
KIFC3-211ENST00000562903 HRCP23327 699 aa22.69■■□□□ 1.22
KIFC3-211ENST00000562903 PCGF6Q9BYE7 350 aa22.44■■□□□ 1.18
KIFC3-211ENST00000562903 PPARGC1BQ86YN6 1023 aaKnown RBP22.36■■□□□ 1.17
KIFC3-211ENST00000562903 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
KIFC3-211ENST00000562903 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
KIFC3-211ENST00000562903 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
KIFC3-211ENST00000562903 LOC105371045A0A1W2PR82 267 aa22.01■■□□□ 1.11
KIFC3-211ENST00000562903 EHMT2Q96KQ7 1210 aa22■■□□□ 1.11
KIFC3-211ENST00000562903 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
KIFC3-211ENST00000562903 PELP1Q8IZL8 1130 aaKnown RBP21.78■■□□□ 1.08
KIFC3-211ENST00000562903 FAM9AQ8IZU1 332 aaPredicted RBP21.76■■□□□ 1.07
KIFC3-211ENST00000562903 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
KIFC3-211ENST00000562903 TRIM26Q12899 539 aaPredicted RBP21.59■■□□□ 1.05
KIFC3-211ENST00000562903 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
KIFC3-211ENST00000562903 TRIM41Q8WV44 630 aa21.4■■□□□ 1.02
KIFC3-211ENST00000562903 ZEB1P37275 1124 aaPredicted RBP21.38■■□□□ 1.01
KIFC3-211ENST00000562903 SCRIBQ14160 1630 aa21.3■■□□□ 1
KIFC3-211ENST00000562903 TTBK1Q5TCY1 1321 aaPredicted RBP21.24■□□□□ 0.99
KIFC3-211ENST00000562903 ABCC9O60706 1549 aa21.18■□□□□ 0.98
KIFC3-211ENST00000562903 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.96
KIFC3-211ENST00000562903 ACIN1Q9UKV3 1341 aaKnown RBP20.96■□□□□ 0.95
KIFC3-211ENST00000562903 NEUROD1Q13562 356 aa20.94■□□□□ 0.94
KIFC3-211ENST00000562903 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
KIFC3-211ENST00000562903 CECR2Q9BXF3 1484 aa20.9■□□□□ 0.94
KIFC3-211ENST00000562903 MYT1Q01538 1121 aa20.89■□□□□ 0.93
KIFC3-211ENST00000562903 GTF3C3Q9Y5Q9 886 aa20.88■□□□□ 0.93
KIFC3-211ENST00000562903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.81■□□□□ 0.92
KIFC3-211ENST00000562903 CENPBP07199 599 aaPredicted RBP20.81■□□□□ 0.92
KIFC3-211ENST00000562903 CCER1Q8TC90 406 aaPredicted RBP20.81■□□□□ 0.92
KIFC3-211ENST00000562903 DIEXFQ68CQ4 756 aaKnown RBP20.71■□□□□ 0.91
KIFC3-211ENST00000562903 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
KIFC3-211ENST00000562903 RANGAP1P46060 587 aaPredicted RBP20.67■□□□□ 0.9
KIFC3-211ENST00000562903 PABPN1Q86U42 306 aaKnown RBP eCLIP20.65■□□□□ 0.9
KIFC3-211ENST00000562903 WIZO95785 1651 aa20.58■□□□□ 0.89
KIFC3-211ENST00000562903 YTHDC1Q96MU7 727 aaKnown RBP20.56■□□□□ 0.88
KIFC3-211ENST00000562903 UBTFP17480 764 aaKnown RBP20.55■□□□□ 0.88
KIFC3-211ENST00000562903 ABCC8Q09428 1581 aa20.4■□□□□ 0.86
KIFC3-211ENST00000562903 NACADO15069 1562 aa20.36■□□□□ 0.85
KIFC3-211ENST00000562903 HNRNPUL2Q1KMD3 747 aaKnown RBP20.31■□□□□ 0.84
KIFC3-211ENST00000562903 CCDC88BA6NC98 1476 aa20.3■□□□□ 0.84
KIFC3-211ENST00000562903 SOGA1O94964 1423 aa20.28■□□□□ 0.84
KIFC3-211ENST00000562903 ZNF316A6NFI3 1004 aaPredicted RBP20.27■□□□□ 0.84
KIFC3-211ENST00000562903 RUSC2Q8N2Y8 1516 aa20.2■□□□□ 0.82
KIFC3-211ENST00000562903 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
KIFC3-211ENST00000562903 MIER1Q8N108 512 aa20.17■□□□□ 0.82
KIFC3-211ENST00000562903 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.81
KIFC3-211ENST00000562903 CEP162Q5TB80 1403 aa20.14■□□□□ 0.81
KIFC3-211ENST00000562903 APLP2Q06481 763 aa20.04■□□□□ 0.8
KIFC3-211ENST00000562903 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
KIFC3-211ENST00000562903 SMARCA4P51532 1647 aa19.97■□□□□ 0.79
KIFC3-211ENST00000562903 SMARCA2P51531 1590 aa19.95■□□□□ 0.78
KIFC3-211ENST00000562903 ITGAEP38570 1179 aa19.92■□□□□ 0.78
KIFC3-211ENST00000562903 TNIKQ9UKE5 1360 aa19.89■□□□□ 0.77
KIFC3-211ENST00000562903 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
KIFC3-211ENST00000562903 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
KIFC3-211ENST00000562903 SUPT16HQ9Y5B9 1047 aaKnown RBP19.81■□□□□ 0.76
KIFC3-211ENST00000562903 GOLGA3Q08378 1498 aa19.78■□□□□ 0.76
KIFC3-211ENST00000562903 UNC13AQ9UPW8 1703 aa19.78■□□□□ 0.76
KIFC3-211ENST00000562903 CLIP1P30622 1438 aa19.77■□□□□ 0.76
KIFC3-211ENST00000562903 ATP1B4Q9UN42 357 aaPredicted RBP19.73■□□□□ 0.75
KIFC3-211ENST00000562903 ANP32EQ9BTT0 268 aa19.72■□□□□ 0.75
KIFC3-211ENST00000562903 TSHZ2Q9NRE2 1034 aa19.69■□□□□ 0.74
KIFC3-211ENST00000562903 RAPGEF2Q9Y4G8 1499 aa19.68■□□□□ 0.74
KIFC3-211ENST00000562903 BCL11AQ9H165 835 aa19.66■□□□□ 0.74
KIFC3-211ENST00000562903 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
KIFC3-211ENST00000562903 CLSPNQ9HAW4 1339 aa19.66■□□□□ 0.74
KIFC3-211ENST00000562903 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
KIFC3-211ENST00000562903 EEA1Q15075 1411 aa19.63■□□□□ 0.73
KIFC3-211ENST00000562903 KANK4Q5T7N3 995 aaPredicted RBP19.62■□□□□ 0.73
KIFC3-211ENST00000562903 BCANQ96GW7 911 aa19.62■□□□□ 0.73
KIFC3-211ENST00000562903 CEP164Q9UPV0 1460 aa19.61■□□□□ 0.73
KIFC3-211ENST00000562903 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
KIFC3-211ENST00000562903 P3H3Q8IVL6 736 aa19.59■□□□□ 0.73
KIFC3-211ENST00000562903 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
KIFC3-211ENST00000562903 VPS8Q8N3P4 1428 aa19.51■□□□□ 0.71
KIFC3-211ENST00000562903 FKBP8Q14318 412 aa19.42■□□□□ 0.7
KIFC3-211ENST00000562903 FAM50AQ14320 339 aaKnown RBP19.42■□□□□ 0.7
KIFC3-211ENST00000562903 KCNH8Q96L42 1107 aa19.41■□□□□ 0.7
KIFC3-211ENST00000562903 HIRIP3Q9BW71 556 aaPredicted RBP19.4■□□□□ 0.7
KIFC3-211ENST00000562903 KIF21BO75037 1637 aa19.38■□□□□ 0.69
KIFC3-211ENST00000562903 DHX57Q6P158 1386 aaKnown RBP19.34■□□□□ 0.69
KIFC3-211ENST00000562903 NEFLP07196 543 aa19.32■□□□□ 0.68
KIFC3-211ENST00000562903 RBM19Q9Y4C8 960 aaKnown RBP19.27■□□□□ 0.68
KIFC3-211ENST00000562903 SIN3AQ96ST3 1273 aa19.27■□□□□ 0.68
KIFC3-211ENST00000562903 ARAP1Q96P48 1450 aa19.26■□□□□ 0.67
KIFC3-211ENST00000562903 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
KIFC3-211ENST00000562903 DDX10Q13206 875 aaKnown RBP19.2■□□□□ 0.66
KIFC3-211ENST00000562903 PEG3Q9GZU2 1588 aa19.2■□□□□ 0.66
KIFC3-211ENST00000562903 ARID3CA6NKF2 412 aa19.19■□□□□ 0.66
KIFC3-211ENST00000562903 CUX2O14529 1486 aa19.18■□□□□ 0.66
KIFC3-211ENST00000562903 CUX1P39880 1505 aa19.17■□□□□ 0.66
KIFC3-211ENST00000562903 TRIM52Q96A61 297 aa19.17■□□□□ 0.66
KIFC3-211ENST00000562903 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
KIFC3-211ENST00000562903 CCNB3Q8WWL7 1395 aa19.16■□□□□ 0.66
KIFC3-211ENST00000562903 ERICH6Q7L0X2 663 aa19.15■□□□□ 0.66
KIFC3-211ENST00000562903 PRXQ9BXM0 1461 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms