RNA–Protein interactions for RNA: ENST00000409387.5

SLC3A1-205, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-205ENST00000409387 NISCHQ9Y2I1 1504 aa21.92■■□□□ 1.1
SLC3A1-205ENST00000409387 PELP1Q8IZL8 1130 aaKnown RBP21.58■■□□□ 1.05
SLC3A1-205ENST00000409387 MYT1Q01538 1121 aa21.56■■□□□ 1.04
SLC3A1-205ENST00000409387 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.96
SLC3A1-205ENST00000409387 SLC24A1O60721 1099 aa21.01■□□□□ 0.95
SLC3A1-205ENST00000409387 PRKCSHP14314 528 aaPredicted RBP20.41■□□□□ 0.86
SLC3A1-205ENST00000409387 ERICH6Q7L0X2 663 aa20.2■□□□□ 0.82
SLC3A1-205ENST00000409387 APLP2Q06481 763 aa20.18■□□□□ 0.82
SLC3A1-205ENST00000409387 DAXXQ9UER7 740 aaPredicted RBP19.86■□□□□ 0.77
SLC3A1-205ENST00000409387 BCL11AQ9H165 835 aa19.36■□□□□ 0.69
SLC3A1-205ENST00000409387 FAM9AQ8IZU1 332 aaPredicted RBP19.01■□□□□ 0.63
SLC3A1-205ENST00000409387 EIF5BO60841 1220 aaKnown RBP18.98■□□□□ 0.63
SLC3A1-205ENST00000409387 CCDC180Q9P1Z9 1646 aa18.88■□□□□ 0.61
SLC3A1-205ENST00000409387 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
SLC3A1-205ENST00000409387 HRCP23327 699 aa18.7■□□□□ 0.58
SLC3A1-205ENST00000409387 NCBP3Q53F19 620 aaKnown RBP18.62■□□□□ 0.57
SLC3A1-205ENST00000409387 ZCCHC6Q5VYS8 1495 aaKnown RBP18.51■□□□□ 0.55
SLC3A1-205ENST00000409387 CENPBP07199 599 aaPredicted RBP18.45■□□□□ 0.54
SLC3A1-205ENST00000409387 PLEKHG5O94827 1062 aa18.39■□□□□ 0.53
SLC3A1-205ENST00000409387 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
SLC3A1-205ENST00000409387 ARXQ96QS3 562 aa18.26■□□□□ 0.51
SLC3A1-205ENST00000409387 UBE2Q2Q8WVN8 375 aa18.21■□□□□ 0.51
SLC3A1-205ENST00000409387 RANGAP1P46060 587 aaPredicted RBP18.16■□□□□ 0.5
SLC3A1-205ENST00000409387 PODXL2Q9NZ53 605 aa18.12■□□□□ 0.49
SLC3A1-205ENST00000409387 DCAF8L2P0C7V8 631 aa18.05■□□□□ 0.48
SLC3A1-205ENST00000409387 RTN4Q9NQC3 1192 aaKnown RBP18.03■□□□□ 0.48
SLC3A1-205ENST00000409387 DCAF1Q9Y4B6 1507 aa18.02■□□□□ 0.48
SLC3A1-205ENST00000409387 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
SLC3A1-205ENST00000409387 ANP32EQ9BTT0 268 aa17.99■□□□□ 0.47
SLC3A1-205ENST00000409387 KLHL34Q8N239 644 aa17.96■□□□□ 0.47
SLC3A1-205ENST00000409387 TIMELESSQ9UNS1 1208 aa17.88■□□□□ 0.45
SLC3A1-205ENST00000409387 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
SLC3A1-205ENST00000409387 PPARGC1BQ86YN6 1023 aaKnown RBP17.82■□□□□ 0.44
SLC3A1-205ENST00000409387 SUPT5HO00267 1087 aaKnown RBP17.78■□□□□ 0.44
SLC3A1-205ENST00000409387 PKNOX2Q96KN3 472 aa17.78■□□□□ 0.44
SLC3A1-205ENST00000409387 ANO8Q9HCE9 1232 aaPredicted RBP17.77■□□□□ 0.44
SLC3A1-205ENST00000409387 ACIN1Q9UKV3 1341 aaKnown RBP17.75■□□□□ 0.43
SLC3A1-205ENST00000409387 CSRNP3Q8WYN3 585 aa17.69■□□□□ 0.42
SLC3A1-205ENST00000409387 ABCC9O60706 1549 aa17.63■□□□□ 0.41
SLC3A1-205ENST00000409387 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
SLC3A1-205ENST00000409387 PDIA4P13667 645 aaKnown RBP17.59■□□□□ 0.41
SLC3A1-205ENST00000409387 HOMEZQ8IX15 550 aa17.59■□□□□ 0.41
SLC3A1-205ENST00000409387 SCRIBQ14160 1630 aa17.58■□□□□ 0.4
SLC3A1-205ENST00000409387 GTF3C3Q9Y5Q9 886 aa17.57■□□□□ 0.4
SLC3A1-205ENST00000409387 NEFLP07196 543 aa17.55■□□□□ 0.4
SLC3A1-205ENST00000409387 TULP1O00294 542 aaPredicted RBP17.51■□□□□ 0.39
SLC3A1-205ENST00000409387 PDE4CQ08493 712 aa17.47■□□□□ 0.39
SLC3A1-205ENST00000409387 NACADO15069 1562 aa17.45■□□□□ 0.38
SLC3A1-205ENST00000409387 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
SLC3A1-205ENST00000409387 AMER1Q5JTC6 1135 aaPredicted RBP17.41■□□□□ 0.38
SLC3A1-205ENST00000409387 ERICH6BQ5W0A0 696 aa17.29■□□□□ 0.36
SLC3A1-205ENST00000409387 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.35
SLC3A1-205ENST00000409387 SALL2Q9Y467 1007 aaPredicted RBP17.26■□□□□ 0.35
SLC3A1-205ENST00000409387 RB1CC1Q8TDY2 1594 aa17.24■□□□□ 0.35
SLC3A1-205ENST00000409387 ZEB1P37275 1124 aaPredicted RBP17.23■□□□□ 0.35
SLC3A1-205ENST00000409387 FGD1P98174 961 aa17.19■□□□□ 0.34
SLC3A1-205ENST00000409387 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
SLC3A1-205ENST00000409387 TAF7LQ5H9L4 462 aa17.19■□□□□ 0.34
SLC3A1-205ENST00000409387 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
SLC3A1-205ENST00000409387 NPM2Q86SE8 214 aaKnown RBP17.16■□□□□ 0.34
SLC3A1-205ENST00000409387 UNC13AQ9UPW8 1703 aa17.13■□□□□ 0.33
SLC3A1-205ENST00000409387 CCDC136Q96JN2 1154 aa17.13■□□□□ 0.33
SLC3A1-205ENST00000409387 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
SLC3A1-205ENST00000409387 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
SLC3A1-205ENST00000409387 TAOK2Q9UL54 1235 aa17.07■□□□□ 0.32
SLC3A1-205ENST00000409387 MROH2BQ7Z745 1585 aa17.03■□□□□ 0.32
SLC3A1-205ENST00000409387 MYT1LQ9UL68 1186 aa17.03■□□□□ 0.32
SLC3A1-205ENST00000409387 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.31
SLC3A1-205ENST00000409387 CHMP4AQ9BY43 222 aa16.97■□□□□ 0.31
SLC3A1-205ENST00000409387 WIZO95785 1651 aa16.96■□□□□ 0.31
SLC3A1-205ENST00000409387 C14orf37Q86TY3 774 aa16.95■□□□□ 0.3
SLC3A1-205ENST00000409387 BRD2P25440 801 aaKnown RBP16.93■□□□□ 0.3
SLC3A1-205ENST00000409387 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
SLC3A1-205ENST00000409387 AAMPQ13685 434 aa16.92■□□□□ 0.3
SLC3A1-205ENST00000409387 LOC105371045A0A1W2PR82 267 aa16.87■□□□□ 0.29
SLC3A1-205ENST00000409387 BAZ1AQ9NRL2 1556 aaPredicted RBP16.86■□□□□ 0.29
SLC3A1-205ENST00000409387 DHX37Q8IY37 1157 aaKnown RBP16.85■□□□□ 0.29
SLC3A1-205ENST00000409387 BICRAQ9NZM4 1560 aa16.84■□□□□ 0.29
SLC3A1-205ENST00000409387 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
SLC3A1-205ENST00000409387 GLIPR1L2Q4G1C9 344 aa16.84■□□□□ 0.29
SLC3A1-205ENST00000409387 FBXO3Q9UK99 471 aa16.81■□□□□ 0.28
SLC3A1-205ENST00000409387 SAMD1Q6SPF0 538 aaPredicted RBP16.81■□□□□ 0.28
SLC3A1-205ENST00000409387 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
SLC3A1-205ENST00000409387 HAP1P54257 671 aaPredicted RBP16.8■□□□□ 0.28
SLC3A1-205ENST00000409387 TSHZ2Q9NRE2 1034 aa16.79■□□□□ 0.28
SLC3A1-205ENST00000409387 KCNA4P22459 653 aa16.78■□□□□ 0.28
SLC3A1-205ENST00000409387 RSPH6AQ9H0K4 717 aa16.78■□□□□ 0.28
SLC3A1-205ENST00000409387 TPRNQ4KMQ1 711 aa16.77■□□□□ 0.28
SLC3A1-205ENST00000409387 RBM10P98175 930 aaKnown RBP16.75■□□□□ 0.27
SLC3A1-205ENST00000409387 ZMYND15Q9H091 742 aa16.74■□□□□ 0.27
SLC3A1-205ENST00000409387 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.73■□□□□ 0.27
SLC3A1-205ENST00000409387 RSPH4AQ5TD94 716 aa16.73■□□□□ 0.27
SLC3A1-205ENST00000409387 DEKP35659 375 aaKnown RBP16.72■□□□□ 0.27
SLC3A1-205ENST00000409387 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
SLC3A1-205ENST00000409387 ZNF326Q5BKZ1 582 aaKnown RBP16.7■□□□□ 0.26
SLC3A1-205ENST00000409387 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
SLC3A1-205ENST00000409387 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
SLC3A1-205ENST00000409387 EIF4G1Q04637 1599 aaKnown RBP16.67■□□□□ 0.26
SLC3A1-205ENST00000409387 BCANQ96GW7 911 aa16.65■□□□□ 0.26
SLC3A1-205ENST00000409387 CDK11AQ9UQ88 783 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms