RNA–Protein interactions for RNA: ENST00000511642.5

CCND3-215, Transcript of cyclin D3, humanhuman

TSL 2 BASIC

Gene CCND3, Length 2,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-215ENST00000511642 NISCHQ9Y2I1 1504 aa28.67■■■□□ 2.18
CCND3-215ENST00000511642 CCDC180Q9P1Z9 1646 aa24.38■■□□□ 1.49
CCND3-215ENST00000511642 SHROOM4Q9ULL8 1493 aa24.34■■□□□ 1.49
CCND3-215ENST00000511642 ZCCHC6Q5VYS8 1495 aaKnown RBP24.3■■□□□ 1.48
CCND3-215ENST00000511642 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
CCND3-215ENST00000511642 DCAF1Q9Y4B6 1507 aa23.58■■□□□ 1.36
CCND3-215ENST00000511642 DCAF8L2P0C7V8 631 aa23.51■■□□□ 1.35
CCND3-215ENST00000511642 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
CCND3-215ENST00000511642 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.32
CCND3-215ENST00000511642 ABCC9O60706 1549 aa22.94■■□□□ 1.26
CCND3-215ENST00000511642 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
CCND3-215ENST00000511642 HRCP23327 699 aa22.7■■□□□ 1.22
CCND3-215ENST00000511642 RSF1Q96T23 1441 aaPredicted RBP22.7■■□□□ 1.22
CCND3-215ENST00000511642 LOC105371045A0A1W2PR82 267 aa22.59■■□□□ 1.21
CCND3-215ENST00000511642 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.21
CCND3-215ENST00000511642 NACADO15069 1562 aa22.49■■□□□ 1.19
CCND3-215ENST00000511642 RB1CC1Q8TDY2 1594 aa22.48■■□□□ 1.19
CCND3-215ENST00000511642 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
CCND3-215ENST00000511642 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
CCND3-215ENST00000511642 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
CCND3-215ENST00000511642 TRIM26Q12899 539 aaPredicted RBP22.18■■□□□ 1.14
CCND3-215ENST00000511642 PPARGC1BQ86YN6 1023 aaKnown RBP22.18■■□□□ 1.14
CCND3-215ENST00000511642 WIZO95785 1651 aa22.15■■□□□ 1.14
CCND3-215ENST00000511642 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
CCND3-215ENST00000511642 FAM9AQ8IZU1 332 aaPredicted RBP22.03■■□□□ 1.12
CCND3-215ENST00000511642 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
CCND3-215ENST00000511642 TOP2AP11388 1531 aaKnown RBP21.84■■□□□ 1.09
CCND3-215ENST00000511642 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
CCND3-215ENST00000511642 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
CCND3-215ENST00000511642 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
CCND3-215ENST00000511642 SMARCA2P51531 1590 aa21.72■■□□□ 1.07
CCND3-215ENST00000511642 CCDC88BA6NC98 1476 aa21.72■■□□□ 1.07
CCND3-215ENST00000511642 ZEB1P37275 1124 aaPredicted RBP21.71■■□□□ 1.07
CCND3-215ENST00000511642 ABCC8Q09428 1581 aa21.66■■□□□ 1.06
CCND3-215ENST00000511642 BICRAQ9NZM4 1560 aa21.55■■□□□ 1.04
CCND3-215ENST00000511642 SOGA1O94964 1423 aa21.47■■□□□ 1.03
CCND3-215ENST00000511642 PEG3Q9GZU2 1588 aa21.45■■□□□ 1.02
CCND3-215ENST00000511642 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.029e-6■■■■■ 50.1
CCND3-215ENST00000511642 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
CCND3-215ENST00000511642 CEP162Q5TB80 1403 aa21.4■■□□□ 1.02
CCND3-215ENST00000511642 EEA1Q15075 1411 aa21.39■■□□□ 1.01
CCND3-215ENST00000511642 TNIKQ9UKE5 1360 aa21.38■■□□□ 1.01
CCND3-215ENST00000511642 RUSC2Q8N2Y8 1516 aa21.37■■□□□ 1.01
CCND3-215ENST00000511642 CSRNP3Q8WYN3 585 aa21.31■■□□□ 1
CCND3-215ENST00000511642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.26■□□□□ 0.99
CCND3-215ENST00000511642 GOLGA3Q08378 1498 aa21.24■□□□□ 0.99
CCND3-215ENST00000511642 ATAD2BQ9ULI0 1458 aa21.24■□□□□ 0.99
CCND3-215ENST00000511642 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
CCND3-215ENST00000511642 CCER1Q8TC90 406 aaPredicted RBP21.18■□□□□ 0.98
CCND3-215ENST00000511642 UBTFP17480 764 aaKnown RBP21.16■□□□□ 0.98
CCND3-215ENST00000511642 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
CCND3-215ENST00000511642 KIF21BO75037 1637 aa21.13■□□□□ 0.97
CCND3-215ENST00000511642 TTBK1Q5TCY1 1321 aaPredicted RBP21.12■□□□□ 0.97
CCND3-215ENST00000511642 CEP164Q9UPV0 1460 aa21.11■□□□□ 0.97
CCND3-215ENST00000511642 SLC24A1O60721 1099 aa21.01■□□□□ 0.95
CCND3-215ENST00000511642 CLIP1P30622 1438 aa20.98■□□□□ 0.95
CCND3-215ENST00000511642 TOP2BQ02880 1626 aa20.97■□□□□ 0.95
CCND3-215ENST00000511642 RAPGEF2Q9Y4G8 1499 aa20.96■□□□□ 0.95
CCND3-215ENST00000511642 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
CCND3-215ENST00000511642 VPS8Q8N3P4 1428 aa20.92■□□□□ 0.94
CCND3-215ENST00000511642 BIVM-ERCC5R4GMW8 1640 aa20.9■□□□□ 0.94
CCND3-215ENST00000511642 HMGXB3Q12766 1538 aa20.84■□□□□ 0.93
CCND3-215ENST00000511642 DIEXFQ68CQ4 756 aaKnown RBP20.82■□□□□ 0.92
CCND3-215ENST00000511642 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
CCND3-215ENST00000511642 PRXQ9BXM0 1461 aa20.78■□□□□ 0.92
CCND3-215ENST00000511642 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
CCND3-215ENST00000511642 CUX1P39880 1505 aa20.75■□□□□ 0.91
CCND3-215ENST00000511642 HNRNPUL2Q1KMD3 747 aaKnown RBP20.73■□□□□ 0.91
CCND3-215ENST00000511642 ACIN1Q9UKV3 1341 aaKnown RBP20.72■□□□□ 0.91
CCND3-215ENST00000511642 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
CCND3-215ENST00000511642 NEUROD1Q13562 356 aa20.68■□□□□ 0.9
CCND3-215ENST00000511642 ZNF316A6NFI3 1004 aaPredicted RBP20.68■□□□□ 0.9
CCND3-215ENST00000511642 CFTRP13569 1480 aa20.67■□□□□ 0.9
CCND3-215ENST00000511642 RANGAP1P46060 587 aaPredicted RBP20.67■□□□□ 0.9
CCND3-215ENST00000511642 APLP2Q06481 763 aa20.66■□□□□ 0.9
CCND3-215ENST00000511642 KIF27Q86VH2 1401 aa20.61■□□□□ 0.89
CCND3-215ENST00000511642 CENPBP07199 599 aaPredicted RBP20.53■□□□□ 0.88
CCND3-215ENST00000511642 PRDM2Q13029 1718 aa20.51■□□□□ 0.87
CCND3-215ENST00000511642 KANK4Q5T7N3 995 aaPredicted RBP20.51■□□□□ 0.87
CCND3-215ENST00000511642 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
CCND3-215ENST00000511642 ARHGAP35Q9NRY4 1499 aa20.49■□□□□ 0.87
CCND3-215ENST00000511642 RRBP1Q9P2E9 1410 aaKnown RBP20.47■□□□□ 0.87
CCND3-215ENST00000511642 DHX57Q6P158 1386 aaKnown RBP20.45■□□□□ 0.86
CCND3-215ENST00000511642 GTF3C3Q9Y5Q9 886 aa20.44■□□□□ 0.86
CCND3-215ENST00000511642 CLSPNQ9HAW4 1339 aa20.43■□□□□ 0.86
CCND3-215ENST00000511642 CUX2O14529 1486 aa20.41■□□□□ 0.86
CCND3-215ENST00000511642 IGF1RP08069 1367 aa20.4■□□□□ 0.86
CCND3-215ENST00000511642 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.86
CCND3-215ENST00000511642 MIER1Q8N108 512 aa20.39■□□□□ 0.85
CCND3-215ENST00000511642 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
CCND3-215ENST00000511642 CCNB3Q8WWL7 1395 aa20.33■□□□□ 0.85
CCND3-215ENST00000511642 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
CCND3-215ENST00000511642 MAP3K1Q13233 1512 aa20.28■□□□□ 0.84
CCND3-215ENST00000511642 TIAM1Q13009 1591 aa20.28■□□□□ 0.84
CCND3-215ENST00000511642 YTHDC1Q96MU7 727 aaKnown RBP20.28■□□□□ 0.84
CCND3-215ENST00000511642 CC2D2AQ9P2K1 1620 aa20.23■□□□□ 0.83
CCND3-215ENST00000511642 FANCD2Q9BXW9 1451 aa20.2■□□□□ 0.82
CCND3-215ENST00000511642 LRRC9Q6ZRR7 1453 aa20.19■□□□□ 0.82
CCND3-215ENST00000511642 DNMBPQ6XZF7 1577 aa20.15■□□□□ 0.82
CCND3-215ENST00000511642 CFAP43Q8NDM7 1665 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms