Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SSBP3Q9BWW4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AC027237.1-201ENST00000560942 655 ntBASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 AP001505.2-201ENST00000616815 443 ntBASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 CU633904.3-201ENST00000624042 1029 ntBASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP3Q9BWW4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms