RNA–Protein interactions for RNA: ENST00000559554.5

CHRNA5-203, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA5, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-203ENST00000559554 NISCHQ9Y2I1 1504 aa38.84■■■■□ 3.81
CHRNA5-203ENST00000559554 ABCC9O60706 1549 aa37.26■■■■□ 3.55
CHRNA5-203ENST00000559554 DNAJC5BQ9UF47 199 aa36.55■■■■□ 3.44
CHRNA5-203ENST00000559554 CCDC180Q9P1Z9 1646 aa35.56■■■■□ 3.28
CHRNA5-203ENST00000559554 DNAJC5Q9H3Z4 198 aa34.69■■■■□ 3.14
CHRNA5-203ENST00000559554 RB1CC1Q8TDY2 1594 aa34.65■■■■□ 3.14
CHRNA5-203ENST00000559554 PABPN1Q86U42 306 aaKnown RBP eCLIP34.46■■■■□ 3.11
CHRNA5-203ENST00000559554 UNC13AQ9UPW8 1703 aa34.04■■■■□ 3.04
CHRNA5-203ENST00000559554 NACADO15069 1562 aa33.99■■■■□ 3.03
CHRNA5-203ENST00000559554 BICRAQ9NZM4 1560 aa33.81■■■■□ 3
CHRNA5-203ENST00000559554 CECR2Q9BXF3 1484 aa33.69■■■□□ 2.98
CHRNA5-203ENST00000559554 CC2D2AQ9P2K1 1620 aa33.57■■■□□ 2.97
CHRNA5-203ENST00000559554 DCAF8L2P0C7V8 631 aa33.56■■■□□ 2.96
CHRNA5-203ENST00000559554 EIF4G1Q04637 1599 aaKnown RBP33.05■■■□□ 2.88
CHRNA5-203ENST00000559554 SHROOM4Q9ULL8 1493 aa32.98■■■□□ 2.87
CHRNA5-203ENST00000559554 MYO15BQ96JP2 1530 aa32.92■■■□□ 2.86
CHRNA5-203ENST00000559554 CUX2O14529 1486 aa32.71■■■□□ 2.83
CHRNA5-203ENST00000559554 TRIM41Q8WV44 630 aa32.49■■■□□ 2.79
CHRNA5-203ENST00000559554 SCRIBQ14160 1630 aa32.36■■■□□ 2.77
CHRNA5-203ENST00000559554 ERCC6Q03468 1493 aa32.22■■■□□ 2.75
CHRNA5-203ENST00000559554 DCAF1Q9Y4B6 1507 aa31.91■■■□□ 2.7
CHRNA5-203ENST00000559554 ZCCHC6Q5VYS8 1495 aaKnown RBP31.8■■■□□ 2.68
CHRNA5-203ENST00000559554 NESP48681 1621 aa31.57■■■□□ 2.64
CHRNA5-203ENST00000559554 THOC2Q8NI27 1593 aaKnown RBP31.53■■■□□ 2.64
CHRNA5-203ENST00000559554 NCAPD3P42695 1498 aa31.42■■■□□ 2.62
CHRNA5-203ENST00000559554 SMARCA2P51531 1590 aa31.2■■■□□ 2.58
CHRNA5-203ENST00000559554 KIF21AQ7Z4S6 1674 aa31.11■■■□□ 2.57
CHRNA5-203ENST00000559554 ATAD2BQ9ULI0 1458 aa31.11■■■□□ 2.57
CHRNA5-203ENST00000559554 BAZ1AQ9NRL2 1556 aaPredicted RBP31.04■■■□□ 2.56
CHRNA5-203ENST00000559554 HMGXB3Q12766 1538 aa31■■■□□ 2.55
CHRNA5-203ENST00000559554 OSCARQ8IYS5 282 aa30.98■■■□□ 2.55
CHRNA5-203ENST00000559554 LAMC3Q9Y6N6 1575 aa30.97■■■□□ 2.55
CHRNA5-203ENST00000559554 AEBP2Q6ZN18 517 aaPredicted RBP30.91■■■□□ 2.54
CHRNA5-203ENST00000559554 RIMBP3CA6NJZ7 1639 aa30.83■■■□□ 2.53
CHRNA5-203ENST00000559554 RIMBP3BA6NNM3 1639 aa30.83■■■□□ 2.53
CHRNA5-203ENST00000559554 RIMBP3Q9UFD9 1639 aa30.83■■■□□ 2.53
CHRNA5-203ENST00000559554 PDS5BQ9NTI5 1447 aa30.82■■■□□ 2.52
CHRNA5-203ENST00000559554 MRC2Q9UBG0 1479 aa30.69■■■□□ 2.5
CHRNA5-203ENST00000559554 BAZ1BQ9UIG0 1483 aaKnown RBP30.69■■■□□ 2.5
CHRNA5-203ENST00000559554 WDR62O43379 1518 aa30.68■■■□□ 2.5
CHRNA5-203ENST00000559554 SMARCA4P51532 1647 aa30.67■■■□□ 2.5
CHRNA5-203ENST00000559554 TRHP20396 242 aaPredicted RBP30.59■■■□□ 2.49
CHRNA5-203ENST00000559554 ARHGEF11O15085 1522 aa30.51■■■□□ 2.47
CHRNA5-203ENST00000559554 CYB5RLQ6IPT4 315 aa30.42■■■□□ 2.46
CHRNA5-203ENST00000559554 CADPSQ9ULU8 1353 aa30.39■■■□□ 2.45
CHRNA5-203ENST00000559554 PEG3Q9GZU2 1588 aa30.34■■■□□ 2.45
CHRNA5-203ENST00000559554 CEP164Q9UPV0 1460 aa30.22■■■□□ 2.43
CHRNA5-203ENST00000559554 ARAP1Q96P48 1450 aa30.12■■■□□ 2.41
CHRNA5-203ENST00000559554 FANCD2Q9BXW9 1451 aa30.06■■■□□ 2.4
CHRNA5-203ENST00000559554 ILDR1Q86SU0 546 aaPredicted RBP29.97■■■□□ 2.39
CHRNA5-203ENST00000559554 URB2Q14146 1524 aaKnown RBP29.96■■■□□ 2.39
CHRNA5-203ENST00000559554 MROH2BQ7Z745 1585 aa29.96■■■□□ 2.39
CHRNA5-203ENST00000559554 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.38
CHRNA5-203ENST00000559554 CHD1O14646 1710 aa29.77■■■□□ 2.36
CHRNA5-203ENST00000559554 RSF1Q96T23 1441 aaPredicted RBP29.71■■■□□ 2.35
CHRNA5-203ENST00000559554 CFTRP13569 1480 aa29.69■■■□□ 2.34
CHRNA5-203ENST00000559554 IFT140Q96RY7 1462 aa29.67■■■□□ 2.34
CHRNA5-203ENST00000559554 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
CHRNA5-203ENST00000559554 WIZO95785 1651 aa29.55■■■□□ 2.32
CHRNA5-203ENST00000559554 FBLN2P98095 1184 aa29.52■■■□□ 2.32
CHRNA5-203ENST00000559554 AQRO60306 1485 aaKnown RBP eCLIP29.4■■■□□ 2.3
CHRNA5-203ENST00000559554 PRDM2Q13029 1718 aa29.32■■■□□ 2.28
CHRNA5-203ENST00000559554 CLASP1Q7Z460 1538 aa29.31■■■□□ 2.28
CHRNA5-203ENST00000559554 TOPBP1Q92547 1522 aa29.31■■■□□ 2.28
CHRNA5-203ENST00000559554 TARBP1Q13395 1621 aaKnown RBP29.22■■■□□ 2.27
CHRNA5-203ENST00000559554 KDM4FA0A1W2PPD8 638 aa29.15■■■□□ 2.26
CHRNA5-203ENST00000559554 GAPVD1Q14C86 1478 aa29.12■■■□□ 2.25
CHRNA5-203ENST00000559554 SYNJ1O43426 1573 aa29.09■■■□□ 2.25
CHRNA5-203ENST00000559554 ABCC8Q09428 1581 aa29.05■■■□□ 2.24
CHRNA5-203ENST00000559554 KIF13AQ9H1H9 1805 aa29.04■■■□□ 2.24
CHRNA5-203ENST00000559554 DNMBPQ6XZF7 1577 aa29.04■■■□□ 2.24
CHRNA5-203ENST00000559554 SNAPC4Q5SXM2 1469 aa29■■■□□ 2.23
CHRNA5-203ENST00000559554 CHMP7Q8WUX9 453 aaPredicted RBP28.99■■■□□ 2.23
CHRNA5-203ENST00000559554 TOP2AP11388 1531 aaKnown RBP28.95■■■□□ 2.23
CHRNA5-203ENST00000559554 TDRD9Q8NDG6 1382 aaKnown RBP28.94■■■□□ 2.22
CHRNA5-203ENST00000559554 POLA1P09884 1462 aaPredicted RBP28.91■■■□□ 2.22
CHRNA5-203ENST00000559554 RAD54L2Q9Y4B4 1467 aa28.88■■■□□ 2.21
CHRNA5-203ENST00000559554 ERCC6L2Q5T890 1561 aa28.82■■■□□ 2.2
CHRNA5-203ENST00000559554 MAGI1Q96QZ7 1491 aaPredicted RBP28.8■■■□□ 2.2
CHRNA5-203ENST00000559554 SYNJ2O15056 1496 aa28.75■■■□□ 2.19
CHRNA5-203ENST00000559554 SOGA1O94964 1423 aa28.74■■■□□ 2.19
CHRNA5-203ENST00000559554 CCDC88BA6NC98 1476 aa28.7■■■□□ 2.18
CHRNA5-203ENST00000559554 WDR97A6NE52 1622 aa28.68■■■□□ 2.18
CHRNA5-203ENST00000559554 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
CHRNA5-203ENST00000559554 HECW2Q9P2P5 1572 aa28.62■■■□□ 2.17
CHRNA5-203ENST00000559554 KDM6BO15054 1643 aa28.62■■■□□ 2.17
CHRNA5-203ENST00000559554 FAM69CQ0P6D2 419 aa28.6■■■□□ 2.17
CHRNA5-203ENST00000559554 FBXO41Q8TF61 875 aa28.58■■■□□ 2.17
CHRNA5-203ENST00000559554 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
CHRNA5-203ENST00000559554 ABCC10Q5T3U5 1492 aa28.53■■■□□ 2.16
CHRNA5-203ENST00000559554 PBRM1Q86U86 1689 aa28.51■■■□□ 2.15
CHRNA5-203ENST00000559554 FGD5Q6ZNL6 1462 aa28.48■■■□□ 2.15
CHRNA5-203ENST00000559554 TSPOAP1O95153 1857 aa28.45■■■□□ 2.15
CHRNA5-203ENST00000559554 ADGRL1O94910 1474 aa28.45■■■□□ 2.14
CHRNA5-203ENST00000559554 DIP2BQ9P265 1576 aa28.43■■■□□ 2.14
CHRNA5-203ENST00000559554 SHROOM2Q13796 1616 aa28.37■■■□□ 2.13
CHRNA5-203ENST00000559554 LMTK3Q96Q04 1460 aa28.34■■■□□ 2.13
CHRNA5-203ENST00000559554 MAPKBP1O60336 1514 aa28.3■■■□□ 2.12
CHRNA5-203ENST00000559554 GRIN2AQ12879 1464 aa28.3■■■□□ 2.12
CHRNA5-203ENST00000559554 NUP160Q12769 1436 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms