Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SUSD3Q96L08 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.13■□□□□ 0.01
SUSD3Q96L08 HMGA1P1-201ENST00000415560 1062 ntBASIC15.13■□□□□ 0.01
SUSD3Q96L08 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SUSD3Q96L08 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.13■□□□□ 0.01
SUSD3Q96L08 LDHBP1-201ENST00000455730 1119 ntBASIC15.13■□□□□ 0.01
SUSD3Q96L08 OR5BD1P-201ENST00000532527 817 ntBASIC15.13■□□□□ 0.01
SUSD3Q96L08 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.13■□□□□ 0.01
SUSD3Q96L08 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.13■□□□□ 0.01
SUSD3Q96L08 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SUSD3Q96L08 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.13■□□□□ 0.01
SUSD3Q96L08 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.13■□□□□ 0.01
SUSD3Q96L08 NUDT4P2-201ENST00000578341 546 ntBASIC15.13■□□□□ 0.01
SUSD3Q96L08 MIR3180-2-201ENST00000581748 88 ntBASIC15.13■□□□□ 0.01
SUSD3Q96L08 MIR4649-201ENST00000582839 64 ntBASIC15.13■□□□□ 0.01
SUSD3Q96L08 AC107464.3-201ENST00000609172 737 ntBASIC15.13■□□□□ 0.01
SUSD3Q96L08 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.13■□□□□ 0.01
SUSD3Q96L08 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.13■□□□□ 0.01
SUSD3Q96L08 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.13■□□□□ 0.01
SUSD3Q96L08 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SUSD3Q96L08 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 AC063926.3-201ENST00000624734 5658 ntBASIC15.12■□□□□ 0.01
SUSD3Q96L08 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 PYY2-201ENST00000315776 282 ntBASIC15.12■□□□□ 0.01
SUSD3Q96L08 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 AL354861.1-201ENST00000445213 355 ntBASIC15.12■□□□□ 0.01
SUSD3Q96L08 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 SCARNA12-201ENST00000459155 270 ntBASIC15.12■□□□□ 0.01
SUSD3Q96L08 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 KLF17P1-201ENST00000547105 1126 ntBASIC15.12■□□□□ 0.01
SUSD3Q96L08 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.12■□□□□ 0.01
SUSD3Q96L08 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 AL590824.1-201ENST00000403828 1349 ntBASIC15.12■□□□□ 0.01
SUSD3Q96L08 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SUSD3Q96L08 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
SUSD3Q96L08 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SUSD3Q96L08 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms