RNA–Protein interactions for RNA: ENST00000459155.1

SCARNA12-201, small Cajal body-specific RNA 12, humanhuman

BASIC

Gene SCARNA12, Length 270 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA12-201ENST00000459155 NISCHQ9Y2I1 1504 aa33.71■■■□□ 2.99
SCARNA12-201ENST00000459155 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
SCARNA12-201ENST00000459155 ABCC9O60706 1549 aa29.36■■■□□ 2.29
SCARNA12-201ENST00000459155 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
SCARNA12-201ENST00000459155 RB1CC1Q8TDY2 1594 aa28.15■■■□□ 2.1
SCARNA12-201ENST00000459155 NACADO15069 1562 aa28.13■■■□□ 2.09
SCARNA12-201ENST00000459155 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
SCARNA12-201ENST00000459155 DNAJC5BQ9UF47 199 aa27.96■■■□□ 2.07
SCARNA12-201ENST00000459155 MYO15BQ96JP2 1530 aa27.94■■■□□ 2.06
SCARNA12-201ENST00000459155 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
SCARNA12-201ENST00000459155 UNC13AQ9UPW8 1703 aa27.68■■■□□ 2.02
SCARNA12-201ENST00000459155 SCRIBQ14160 1630 aa27.34■■□□□ 1.97
SCARNA12-201ENST00000459155 PABPN1Q86U42 306 aaKnown RBP eCLIP27.28■■□□□ 1.96
SCARNA12-201ENST00000459155 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.95
SCARNA12-201ENST00000459155 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
SCARNA12-201ENST00000459155 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
SCARNA12-201ENST00000459155 CC2D2AQ9P2K1 1620 aa26.51■■□□□ 1.83
SCARNA12-201ENST00000459155 CECR2Q9BXF3 1484 aa26.49■■□□□ 1.83
SCARNA12-201ENST00000459155 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
SCARNA12-201ENST00000459155 BAZ1AQ9NRL2 1556 aaPredicted RBP26.14■■□□□ 1.78
SCARNA12-201ENST00000459155 MROH2BQ7Z745 1585 aa25.98■■□□□ 1.75
SCARNA12-201ENST00000459155 SMARCA2P51531 1590 aa25.95■■□□□ 1.75
SCARNA12-201ENST00000459155 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
SCARNA12-201ENST00000459155 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
SCARNA12-201ENST00000459155 DNAJC5Q9H3Z4 198 aa25.88■■□□□ 1.73
SCARNA12-201ENST00000459155 PEG3Q9GZU2 1588 aa25.87■■□□□ 1.73
SCARNA12-201ENST00000459155 HMGXB3Q12766 1538 aa25.8■■□□□ 1.72
SCARNA12-201ENST00000459155 WIZO95785 1651 aa25.8■■□□□ 1.72
SCARNA12-201ENST00000459155 BAZ1BQ9UIG0 1483 aaKnown RBP25.75■■□□□ 1.71
SCARNA12-201ENST00000459155 RSF1Q96T23 1441 aaPredicted RBP25.7■■□□□ 1.7
SCARNA12-201ENST00000459155 CUX2O14529 1486 aa25.45■■□□□ 1.66
SCARNA12-201ENST00000459155 TOP2AP11388 1531 aaKnown RBP25.44■■□□□ 1.66
SCARNA12-201ENST00000459155 ERCC6Q03468 1493 aa25.32■■□□□ 1.64
SCARNA12-201ENST00000459155 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
SCARNA12-201ENST00000459155 NESP48681 1621 aa25.26■■□□□ 1.63
SCARNA12-201ENST00000459155 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
SCARNA12-201ENST00000459155 CADPSQ9ULU8 1353 aa25.16■■□□□ 1.62
SCARNA12-201ENST00000459155 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
SCARNA12-201ENST00000459155 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
SCARNA12-201ENST00000459155 PRDM2Q13029 1718 aa25.08■■□□□ 1.61
SCARNA12-201ENST00000459155 PDS5BQ9NTI5 1447 aa25.05■■□□□ 1.6
SCARNA12-201ENST00000459155 CFTRP13569 1480 aa25.02■■□□□ 1.6
SCARNA12-201ENST00000459155 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
SCARNA12-201ENST00000459155 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.57
SCARNA12-201ENST00000459155 CEP164Q9UPV0 1460 aa24.85■■□□□ 1.57
SCARNA12-201ENST00000459155 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
SCARNA12-201ENST00000459155 WDR62O43379 1518 aa24.69■■□□□ 1.54
SCARNA12-201ENST00000459155 URB2Q14146 1524 aaKnown RBP24.61■■□□□ 1.53
SCARNA12-201ENST00000459155 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
SCARNA12-201ENST00000459155 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
SCARNA12-201ENST00000459155 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
SCARNA12-201ENST00000459155 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
SCARNA12-201ENST00000459155 CUX1P39880 1505 aa24.35■■□□□ 1.49
SCARNA12-201ENST00000459155 IFT140Q96RY7 1462 aa24.31■■□□□ 1.48
SCARNA12-201ENST00000459155 POLA1P09884 1462 aaPredicted RBP24.29■■□□□ 1.48
SCARNA12-201ENST00000459155 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
SCARNA12-201ENST00000459155 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
SCARNA12-201ENST00000459155 BIVM-ERCC5R4GMW8 1640 aa24.25■■□□□ 1.47
SCARNA12-201ENST00000459155 WRNQ14191 1432 aaPredicted RBP eCLIP24.25■■□□□ 1.47
SCARNA12-201ENST00000459155 TOP2BQ02880 1626 aa24.22■■□□□ 1.47
SCARNA12-201ENST00000459155 SOGA1O94964 1423 aa24.22■■□□□ 1.47
SCARNA12-201ENST00000459155 SYNJ1O43426 1573 aa24.2■■□□□ 1.47
SCARNA12-201ENST00000459155 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
SCARNA12-201ENST00000459155 OSCARQ8IYS5 282 aa24.19■■□□□ 1.46
SCARNA12-201ENST00000459155 ZNF608Q9ULD9 1512 aaPredicted RBP24.18■■□□□ 1.46
SCARNA12-201ENST00000459155 EIF4G3O43432 1585 aaKnown RBP24.14■■□□□ 1.45
SCARNA12-201ENST00000459155 WDR97A6NE52 1622 aa24.13■■□□□ 1.45
SCARNA12-201ENST00000459155 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.44
SCARNA12-201ENST00000459155 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
SCARNA12-201ENST00000459155 ABCA10Q8WWZ4 1543 aa24.02■■□□□ 1.44
SCARNA12-201ENST00000459155 PBRM1Q86U86 1689 aa24.01■■□□□ 1.43
SCARNA12-201ENST00000459155 RIMBP3CA6NJZ7 1639 aa23.97■■□□□ 1.43
SCARNA12-201ENST00000459155 RIMBP3BA6NNM3 1639 aa23.97■■□□□ 1.43
SCARNA12-201ENST00000459155 RIMBP3Q9UFD9 1639 aa23.97■■□□□ 1.43
SCARNA12-201ENST00000459155 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.43
SCARNA12-201ENST00000459155 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
SCARNA12-201ENST00000459155 CHD1O14646 1710 aa23.92■■□□□ 1.42
SCARNA12-201ENST00000459155 GRIN2BQ13224 1484 aa23.9■■□□□ 1.42
SCARNA12-201ENST00000459155 ARHGEF11O15085 1522 aa23.85■■□□□ 1.41
SCARNA12-201ENST00000459155 SNAPC4Q5SXM2 1469 aa23.85■■□□□ 1.41
SCARNA12-201ENST00000459155 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
SCARNA12-201ENST00000459155 FBLN2P98095 1184 aa23.81■■□□□ 1.4
SCARNA12-201ENST00000459155 ERICH3Q5RHP9 1530 aa23.76■■□□□ 1.39
SCARNA12-201ENST00000459155 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
SCARNA12-201ENST00000459155 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
SCARNA12-201ENST00000459155 SYNJ2O15056 1496 aa23.74■■□□□ 1.39
SCARNA12-201ENST00000459155 ADAMTS12P58397 1594 aa23.69■■□□□ 1.38
SCARNA12-201ENST00000459155 CYB5RLQ6IPT4 315 aa23.66■■□□□ 1.38
SCARNA12-201ENST00000459155 FHAD1B1AJZ9 1412 aa23.65■■□□□ 1.38
SCARNA12-201ENST00000459155 CUL7Q14999 1698 aa23.63■■□□□ 1.37
SCARNA12-201ENST00000459155 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
SCARNA12-201ENST00000459155 IGF1RP08069 1367 aa23.61■■□□□ 1.37
SCARNA12-201ENST00000459155 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
SCARNA12-201ENST00000459155 RUSC2Q8N2Y8 1516 aa23.58■■□□□ 1.36
SCARNA12-201ENST00000459155 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
SCARNA12-201ENST00000459155 CLASP1Q7Z460 1538 aa23.53■■□□□ 1.36
SCARNA12-201ENST00000459155 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
SCARNA12-201ENST00000459155 CARMIL1Q5VZK9 1371 aa23.49■■□□□ 1.35
SCARNA12-201ENST00000459155 TRHP20396 242 aaPredicted RBP23.47■■□□□ 1.35
SCARNA12-201ENST00000459155 NUP160Q12769 1436 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms