Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CYP4F36P-201ENST00000589193 186 ntBASIC15.94■□□□□ 0.14
COL11A1P12107 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
COL11A1P12107 PEBP1P2-201ENST00000603980 558 ntBASIC15.94■□□□□ 0.14
COL11A1P12107 AC126755.5-201ENST00000622756 267 ntBASIC15.94■□□□□ 0.14
COL11A1P12107 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
COL11A1P12107 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
COL11A1P12107 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 AC089987.1-201ENST00000551654 2209 ntBASIC15.93■□□□□ 0.14
COL11A1P12107 Z98885.3-201ENST00000624882 1757 ntBASIC15.93■□□□□ 0.14
COL11A1P12107 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.93■□□□□ 0.14
COL11A1P12107 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
COL11A1P12107 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.93■□□□□ 0.14
COL11A1P12107 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
COL11A1P12107 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC15.93■□□□□ 0.14
COL11A1P12107 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.93■□□□□ 0.14
COL11A1P12107 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC15.93■□□□□ 0.14
COL11A1P12107 RN7SL147P-201ENST00000487345 298 ntBASIC15.93■□□□□ 0.14
COL11A1P12107 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.93■□□□□ 0.14
COL11A1P12107 IGHEP2-201ENST00000519308 1256 ntBASIC15.93■□□□□ 0.14
COL11A1P12107 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.93■□□□□ 0.14
COL11A1P12107 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC15.93■□□□□ 0.14
COL11A1P12107 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.93■□□□□ 0.14
COL11A1P12107 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC15.93■□□□□ 0.14
COL11A1P12107 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC15.93■□□□□ 0.14
COL11A1P12107 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.93■□□□□ 0.14
COL11A1P12107 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL11A1P12107 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.93■□□□□ 0.14
COL11A1P12107 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
COL11A1P12107 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL11A1P12107 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.92■□□□□ 0.14
COL11A1P12107 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
COL11A1P12107 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL11A1P12107 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL11A1P12107 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
COL11A1P12107 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.92■□□□□ 0.14
COL11A1P12107 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.92■□□□□ 0.14
COL11A1P12107 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.92■□□□□ 0.14
COL11A1P12107 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
COL11A1P12107 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC15.92■□□□□ 0.14
COL11A1P12107 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL11A1P12107 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL11A1P12107 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL11A1P12107 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL11A1P12107 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.92■□□□□ 0.14
COL11A1P12107 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
COL11A1P12107 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
COL11A1P12107 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL11A1P12107 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
COL11A1P12107 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.92■□□□□ 0.14
COL11A1P12107 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
COL11A1P12107 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC15.91■□□□□ 0.14
COL11A1P12107 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
COL11A1P12107 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.91■□□□□ 0.14
COL11A1P12107 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.91■□□□□ 0.14
COL11A1P12107 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.91■□□□□ 0.14
COL11A1P12107 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.91■□□□□ 0.14
COL11A1P12107 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
COL11A1P12107 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.91■□□□□ 0.14
COL11A1P12107 FAM187B2P-201ENST00000577135 713 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 AC132812.1-201ENST00000583145 892 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 TYMSP2-201ENST00000589501 424 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 NRADDP-202ENST00000641269 1585 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
COL11A1P12107 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
COL11A1P12107 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.91■□□□□ 0.14
COL11A1P12107 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
COL11A1P12107 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC15.91■□□□□ 0.14
COL11A1P12107 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.91■□□□□ 0.14
COL11A1P12107 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
COL11A1P12107 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.91■□□□□ 0.14
COL11A1P12107 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms