Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COX6A1P12074 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COX6A1P12074 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COX6A1P12074 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COX6A1P12074 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
COX6A1P12074 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.19□□□□□ -0.3
COX6A1P12074 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COX6A1P12074 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COX6A1P12074 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
COX6A1P12074 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.19□□□□□ -0.3
COX6A1P12074 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
COX6A1P12074 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
COX6A1P12074 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
COX6A1P12074 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.19□□□□□ -0.3
COX6A1P12074 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
COX6A1P12074 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COX6A1P12074 LINC00552-201ENST00000625151 2579 ntBASIC13.19□□□□□ -0.3
COX6A1P12074 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
COX6A1P12074 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
COX6A1P12074 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
COX6A1P12074 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.18□□□□□ -0.3
COX6A1P12074 RPL13AP3-202ENST00000494676 1473 ntBASIC13.18□□□□□ -0.3
COX6A1P12074 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
COX6A1P12074 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.18□□□□□ -0.3
COX6A1P12074 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.18□□□□□ -0.3
COX6A1P12074 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.18□□□□□ -0.3
COX6A1P12074 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.18□□□□□ -0.3
COX6A1P12074 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 PYY2-201ENST00000315776 282 ntBASIC13.18□□□□□ -0.3
COX6A1P12074 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.18□□□□□ -0.3
COX6A1P12074 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.18□□□□□ -0.3
COX6A1P12074 PPP1R2P4-201ENST00000424051 595 ntBASIC13.18□□□□□ -0.3
COX6A1P12074 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.18□□□□□ -0.3
COX6A1P12074 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 AC018638.5-201ENST00000450885 754 ntBASIC13.18□□□□□ -0.3
COX6A1P12074 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
COX6A1P12074 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.18□□□□□ -0.3
COX6A1P12074 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.18□□□□□ -0.3
COX6A1P12074 AC095040.1-201ENST00000513286 675 ntBASIC13.18□□□□□ -0.3
COX6A1P12074 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.18□□□□□ -0.3
COX6A1P12074 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 HERC2P11-201ENST00000562845 725 ntBASIC13.18□□□□□ -0.3
COX6A1P12074 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.18□□□□□ -0.3
COX6A1P12074 AC100756.2-201ENST00000569537 736 ntBASIC13.18□□□□□ -0.3
COX6A1P12074 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.18□□□□□ -0.3
COX6A1P12074 MIR3180-2-201ENST00000581748 88 ntBASIC13.18□□□□□ -0.3
COX6A1P12074 MIR4649-201ENST00000582839 64 ntBASIC13.18□□□□□ -0.3
COX6A1P12074 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
COX6A1P12074 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
COX6A1P12074 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
COX6A1P12074 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
COX6A1P12074 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
COX6A1P12074 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COX6A1P12074 LINC02228-204ENST00000642115 2962 ntBASIC13.17□□□□□ -0.3
COX6A1P12074 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms